Protein–RNA interactions for Protein: P43007

SLC1A4, Neutral amino acid transporter A, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4P43007 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC1A4P43007 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC1A4P43007 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC1A4P43007 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC1A4P43007 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC1A4P43007 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.82■■□□□ 1.4
SLC1A4P43007 AC060766.5-201ENST00000590539 871 ntBASIC23.82■■□□□ 1.4
SLC1A4P43007 ITM2C-210ENST00000620962 501 ntBASIC23.82■■□□□ 1.4
SLC1A4P43007 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.82■■□□□ 1.4
SLC1A4P43007 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SLC1A4P43007 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.82■■□□□ 1.4
SLC1A4P43007 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SLC1A4P43007 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC1A4P43007 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.81■■□□□ 1.4
SLC1A4P43007 AL049796.1-201ENST00000565336 1766 ntBASIC23.81■■□□□ 1.4
SLC1A4P43007 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SLC1A4P43007 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC1A4P43007 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC1A4P43007 KRT18P29-201ENST00000397031 1267 ntBASIC23.81■■□□□ 1.4
SLC1A4P43007 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.81■■□□□ 1.4
SLC1A4P43007 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC1A4P43007 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC1A4P43007 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC1A4P43007 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SLC1A4P43007 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SLC1A4P43007 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC1A4P43007 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.8■■□□□ 1.4
SLC1A4P43007 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
SLC1A4P43007 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC1A4P43007 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC1A4P43007 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
SLC1A4P43007 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC1A4P43007 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC1A4P43007 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC1A4P43007 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC1A4P43007 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC1A4P43007 AL356652.1-201ENST00000615962 565 ntBASIC23.79■■□□□ 1.4
SLC1A4P43007 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
SLC1A4P43007 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
SLC1A4P43007 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC1A4P43007 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC1A4P43007 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC1A4P43007 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC1A4P43007 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC1A4P43007 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC1A4P43007 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC1A4P43007 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC1A4P43007 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC1A4P43007 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC1A4P43007 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC1A4P43007 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC1A4P43007 C2orf69P4-201ENST00000565394 541 ntBASIC23.78■■□□□ 1.4
SLC1A4P43007 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
SLC1A4P43007 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC1A4P43007 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC1A4P43007 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.78■■□□□ 1.4
SLC1A4P43007 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC1A4P43007 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC1A4P43007 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SLC1A4P43007 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC1A4P43007 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC1A4P43007 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC1A4P43007 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC1A4P43007 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC1A4P43007 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC1A4P43007 AC026366.1-201ENST00000488803 879 ntBASIC23.77■■□□□ 1.4
SLC1A4P43007 AP003097.1-201ENST00000530657 1135 ntBASIC23.77■■□□□ 1.4
SLC1A4P43007 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC1A4P43007 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC1A4P43007 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC1A4P43007 AC092368.3-202ENST00000574180 1591 ntBASIC23.77■■□□□ 1.4
SLC1A4P43007 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SLC1A4P43007 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 FEM1AP4-201ENST00000443167 1987 ntBASIC23.76■■□□□ 1.39
SLC1A4P43007 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.76■■□□□ 1.39
SLC1A4P43007 PNMA6B-201ENST00000538162 1200 ntBASIC23.76■■□□□ 1.39
SLC1A4P43007 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.76■■□□□ 1.39
SLC1A4P43007 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SLC1A4P43007 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC1A4P43007 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC1A4P43007 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC1A4P43007 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC1A4P43007 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC1A4P43007 PRORSD1P-201ENST00000295112 541 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms