Protein–RNA interactions for Protein: P40561

SGN1, RNA-binding protein SGN1, yeastyeast

Known RBP RIP-Chip data

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGN1P40561 YMR050CYMR050C 5268 nt2.41□□□□□ -2.02
SGN1P40561 YOL103W-BYOL103W-B 5268 nt2.41□□□□□ -2.02
SGN1P40561 YBR012W-BYBR012W-B 5271 nt2.41□□□□□ -2.02
SGN1P40561 YOR142W-BYOR142W-B 5268 nt2.41□□□□□ -2.02
SGN1P40561 YPL257W-BYPL257W-B 5268 nt2.41□□□□□ -2.02
SGN1P40561 YPR158W-BYPR158W-B 5271 nt2.41□□□□□ -2.02
SGN1P40561 YML108WYML108W 318 nt2.41□□□□□ -2.02
SGN1P40561 DDR48YMR173W 1293 nt2.41□□□□□ -2.02
SGN1P40561 SIP18YMR175W 240 nt2.41□□□□□ -2.02
SGN1P40561 YNL010WYNL010W 726 nt2.41□□□□□ -2.02
SGN1P40561 snR54snR54 86 nt2.41□□□□□ -2.02
SGN1P40561 YBL005W-BYBL005W-B 5268 nt2.41□□□□□ -2.02
SGN1P40561 YPK1YKL126W 2043 nt2.41□□□□□ -2.02
SGN1P40561 MRD1YPR112C 2664 nt2.4□□□□□ -2.02
SGN1P40561 SAK1YER129W 3429 nt2.4□□□□□ -2.03
SGN1P40561 YDL068WYDL068W 330 nt2.4□□□□□ -2.03
SGN1P40561 YGL014C-AYGL014C-A 162 nt2.4□□□□□ -2.03
SGN1P40561 YGL165CYGL165C 579 nt2.4□□□□□ -2.03
SGN1P40561 YHR125WYHR125W 306 nt2.4□□□□□ -2.03
SGN1P40561 YIL175WYIL175W 318 nt2.4□□□□□ -2.03
SGN1P40561 YJL222W-BYJL222W-B 138 nt2.4□□□□□ -2.03
SGN1P40561 FUN30YAL019W 3396 nt2.4□□□□□ -2.03
SGN1P40561 EDS1YBR033W 2760 nt2.4□□□□□ -2.03
SGN1P40561 NMD2YHR077C 3270 nt2.4□□□□□ -2.03
SGN1P40561 UBP11YKR098C 2154 nt2.4□□□□□ -2.03
SGN1P40561 RSE1YML049C 4086 nt2.39□□□□□ -2.03
SGN1P40561 PPN1YDR452W 2025 nt2.39□□□□□ -2.03
SGN1P40561 NCL1YBL024W 2055 nt2.39□□□□□ -2.03
SGN1P40561 YEL018C-AYEL018C-A 534 nt2.39□□□□□ -2.03
SGN1P40561 RPF1YHR088W 888 nt2.39□□□□□ -2.03
SGN1P40561 ICY1YMR195W 384 nt2.39□□□□□ -2.03
SGN1P40561 RPS7BYNL096C 573 nt2.39□□□□□ -2.03
SGN1P40561 YNL324WYNL324W 396 nt2.39□□□□□ -2.03
SGN1P40561 BUD21YOR078W 645 nt2.39□□□□□ -2.03
SGN1P40561 RPL33AYPL143W 324 nt2.39□□□□□ -2.03
SGN1P40561 YKU80YMR106C 1890 nt2.39□□□□□ -2.03
SGN1P40561 PMR1YGL167C 2853 nt2.38□□□□□ -2.03
SGN1P40561 KRE33YNL132W 3171 nt2.38□□□□□ -2.03
SGN1P40561 YEL030C-AYEL030C-A 315 nt2.38□□□□□ -2.03
SGN1P40561 TIM8YJR135W-A 264 nt2.38□□□□□ -2.03
SGN1P40561 SPE1YKL184W 1401 nt2.38□□□□□ -2.03
SGN1P40561 YLR222C-AYLR222C-A 231 nt2.38□□□□□ -2.03
SGN1P40561 YLR379WYLR379W 375 nt2.38□□□□□ -2.03
SGN1P40561 SEN15YMR059W 387 nt2.38□□□□□ -2.03
SGN1P40561 NUP100YKL068W 2880 nt2.38□□□□□ -2.03
SGN1P40561 YJL016WYJL016W 1686 nt2.37□□□□□ -2.03
SGN1P40561 MSL5YLR116W 1431 nt2.37□□□□□ -2.03
SGN1P40561 YKR078WYKR078W 1758 nt2.37□□□□□ -2.03
SGN1P40561 MZM1YDR493W 372 nt2.37□□□□□ -2.03
SGN1P40561 YER084W-AYER084W-A 513 nt2.37□□□□□ -2.03
SGN1P40561 ERP6YGL002W 651 nt2.37□□□□□ -2.03
SGN1P40561 VAR1Q0140 1197 nt2.37□□□□□ -2.03
SGN1P40561 YJR079WYJR079W 330 nt2.37□□□□□ -2.03
SGN1P40561 SGM1YJR134C 2124 nt2.37□□□□□ -2.03
SGN1P40561 ORC2YBR060C 1863 nt2.37□□□□□ -2.03
SGN1P40561 KAP123YER110C 3342 nt2.36□□□□□ -2.03
SGN1P40561 TWF1YGR080W 999 nt2.36□□□□□ -2.03
SGN1P40561 YHR214W-AYHR214W-A 486 nt2.36□□□□□ -2.03
SGN1P40561 tT(UGU)Q1tT(UGU)Q1 76 nt2.36□□□□□ -2.03
SGN1P40561 RPL40AYIL148W 387 nt2.36□□□□□ -2.03
SGN1P40561 YLR264C-AYLR264C-A 117 nt2.36□□□□□ -2.03
SGN1P40561 YAR068WYAR068W 486 nt2.36□□□□□ -2.03
SGN1P40561 CBF2YGR140W 2871 nt2.36□□□□□ -2.03
SGN1P40561 REV1YOR346W 2958 nt2.36□□□□□ -2.03
SGN1P40561 YLR278CYLR278C 4026 nt2.36□□□□□ -2.03
SGN1P40561 RRP6YOR001W 2202 nt2.36□□□□□ -2.03
SGN1P40561 HMLALPHA2YCL067C 633 nt2.35□□□□□ -2.03
SGN1P40561 MATALPHA2YCR039C 633 nt2.35□□□□□ -2.03
SGN1P40561 ATP17YDR377W 306 nt2.35□□□□□ -2.03
SGN1P40561 YKR033CYKR033C 426 nt2.35□□□□□ -2.03
SGN1P40561 CCW14YLR390W-A 717 nt2.35□□□□□ -2.03
SGN1P40561 INO80YGL150C 4470 nt2.34□□□□□ -2.03
SGN1P40561 TCB2YNL087W 3537 nt2.34□□□□□ -2.03
SGN1P40561 YDL025W-AYDL025W-A 105 nt2.34□□□□□ -2.03
SGN1P40561 YOR248WYOR248W 303 nt2.34□□□□□ -2.03
SGN1P40561 snR41snR41 95 nt2.34□□□□□ -2.03
SGN1P40561 YBR277CYBR277C 402 nt2.34□□□□□ -2.03
SGN1P40561 SEC7YDR170C 6030 nt2.34□□□□□ -2.04
SGN1P40561 YPL216WYPL216W 3309 nt2.34□□□□□ -2.04
SGN1P40561 PRK1YIL095W 2433 nt2.33□□□□□ -2.04
SGN1P40561 NUP82YJL061W 2142 nt2.33□□□□□ -2.04
SGN1P40561 MUD2YKL074C 1584 nt2.33□□□□□ -2.04
SGN1P40561 YER006C-AYER006C-A 318 nt2.33□□□□□ -2.04
SGN1P40561 YGR018CYGR018C 330 nt2.33□□□□□ -2.04
SGN1P40561 RPC10YHR143W-A 213 nt2.33□□□□□ -2.04
SGN1P40561 AYR1YIL124W 894 nt2.33□□□□□ -2.04
SGN1P40561 SHE2YKL130C 741 nt2.33□□□□□ -2.04
SGN1P40561 AIM29YKR074W 468 nt2.33□□□□□ -2.04
SGN1P40561 TSC3YBR058C-A 243 nt2.33□□□□□ -2.04
SGN1P40561 ACM1YPL267W 630 nt2.33□□□□□ -2.04
SGN1P40561 YPL276WYPL276W 438 nt2.33□□□□□ -2.04
SGN1P40561 YBR085C-AYBR085C-A 258 nt2.33□□□□□ -2.04
SGN1P40561 YDR239CYDR239C 2364 nt2.33□□□□□ -2.04
SGN1P40561 SOK2YMR016C 2358 nt2.33□□□□□ -2.04
SGN1P40561 GCD6YDR211W 2139 nt2.33□□□□□ -2.04
SGN1P40561 YJL181WYJL181W 1836 nt2.33□□□□□ -2.04
SGN1P40561 YSW1YBR148W 1830 nt2.33□□□□□ -2.04
SGN1P40561 IRA2YOL081W 9240 nt2.33□□□□□ -2.04
SGN1P40561 YDR194W-AYDR194W-A 153 nt2.32□□□□□ -2.04
SGN1P40561 YER188C-AYER188C-A 300 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms