Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 snR80snR80 171 nt3.57□□□□□ -1.84
PEX28P38848 AST2YER101C 1293 nt3.57□□□□□ -1.84
PEX28P38848 MSS11YMR164C 2277 nt3.57□□□□□ -1.84
PEX28P38848 SWD3YBR175W 948 nt3.57□□□□□ -1.84
PEX28P38848 OSW7YFR039C 1533 nt3.56□□□□□ -1.84
PEX28P38848 ZDS1YMR273C 2748 nt3.56□□□□□ -1.84
PEX28P38848 YDL041WYDL041W 354 nt3.56□□□□□ -1.84
PEX28P38848 RPS17BYDR447C 411 nt3.56□□□□□ -1.84
PEX28P38848 MZM1YDR493W 372 nt3.56□□□□□ -1.84
PEX28P38848 RPS18BYML026C 441 nt3.56□□□□□ -1.84
PEX28P38848 FSH3YOR280C 801 nt3.56□□□□□ -1.84
PEX28P38848 YPL182CYPL182C 384 nt3.56□□□□□ -1.84
PEX28P38848 NSP1YJL041W 2472 nt3.56□□□□□ -1.84
PEX28P38848 YDR034C-DYDR034C-D 5313 nt3.55□□□□□ -1.84
PEX28P38848 REV1YOR346W 2958 nt3.55□□□□□ -1.84
PEX28P38848 MYO5YMR109W 3660 nt3.55□□□□□ -1.84
PEX28P38848 tF(GAA)DtF(GAA)D 73 nt3.55□□□□□ -1.84
PEX28P38848 tF(GAA)NtF(GAA)N 73 nt3.55□□□□□ -1.84
PEX28P38848 tK(UUU)DtK(UUU)D 73 nt3.55□□□□□ -1.84
PEX28P38848 tK(UUU)G1tK(UUU)G1 73 nt3.55□□□□□ -1.84
PEX28P38848 tK(UUU)G2tK(UUU)G2 73 nt3.55□□□□□ -1.84
PEX28P38848 tK(UUU)KtK(UUU)K 73 nt3.55□□□□□ -1.84
PEX28P38848 tK(UUU)LtK(UUU)L 73 nt3.55□□□□□ -1.84
PEX28P38848 tK(UUU)OtK(UUU)O 73 nt3.55□□□□□ -1.84
PEX28P38848 tK(UUU)PtK(UUU)P 73 nt3.55□□□□□ -1.84
PEX28P38848 YGR174W-AYGR174W-A 87 nt3.55□□□□□ -1.84
PEX28P38848 LCL2YLR104W 396 nt3.55□□□□□ -1.84
PEX28P38848 YLR458WYLR458W 381 nt3.55□□□□□ -1.84
PEX28P38848 ATP15YPL271W 189 nt3.55□□□□□ -1.84
PEX28P38848 BRO1YPL084W 2535 nt3.54□□□□□ -1.84
PEX28P38848 ABP140YOR239W 1887 nt3.54□□□□□ -1.84
PEX28P38848 YDR344CYDR344C 444 nt3.54□□□□□ -1.84
PEX28P38848 RPS23AYGR118W 438 nt3.54□□□□□ -1.84
PEX28P38848 RPL14BYHL001W 417 nt3.54□□□□□ -1.84
PEX28P38848 YAL064W-BYAL064W-B 381 nt3.54□□□□□ -1.84
PEX28P38848 YOR050CYOR050C 348 nt3.54□□□□□ -1.84
PEX28P38848 YBR137WYBR137W 540 nt3.54□□□□□ -1.84
PEX28P38848 ETP1YHL010C 1758 nt3.53□□□□□ -1.84
PEX28P38848 CDC36YDL165W 576 nt3.53□□□□□ -1.84
PEX28P38848 HSK3YKL138C-A 210 nt3.53□□□□□ -1.84
PEX28P38848 YKR033CYKR033C 426 nt3.53□□□□□ -1.84
PEX28P38848 RPL8BYLL045C 771 nt3.53□□□□□ -1.84
PEX28P38848 SHQ1YIL104C 1524 nt3.53□□□□□ -1.84
PEX28P38848 COG3YER157W 2406 nt3.53□□□□□ -1.84
PEX28P38848 MTC4YBR255W 2085 nt3.53□□□□□ -1.84
PEX28P38848 SGO1YOR073W 1773 nt3.53□□□□□ -1.84
PEX28P38848 HEF3YNL014W 3135 nt3.53□□□□□ -1.85
PEX28P38848 SIN3YOL004W 4611 nt3.52□□□□□ -1.85
PEX28P38848 YLR352WYLR352W 2424 nt3.52□□□□□ -1.85
PEX28P38848 SWI1YPL016W 3945 nt3.52□□□□□ -1.85
PEX28P38848 YJL181WYJL181W 1836 nt3.52□□□□□ -1.85
PEX28P38848 RPL35AYDL191W 363 nt3.52□□□□□ -1.85
PEX28P38848 RPS24AYER074W 408 nt3.52□□□□□ -1.85
PEX28P38848 YMR31YFR049W 372 nt3.52□□□□□ -1.85
PEX28P38848 MBB1YJL199C 327 nt3.52□□□□□ -1.85
PEX28P38848 YOR072W-AYOR072W-A 249 nt3.52□□□□□ -1.85
PEX28P38848 GYP7YDL234C 2241 nt3.52□□□□□ -1.85
PEX28P38848 ZDS2YML109W 2829 nt3.52□□□□□ -1.85
PEX28P38848 CDC24YAL041W 2565 nt3.51□□□□□ -1.85
PEX28P38848 HTL1YCR020W-B 237 nt3.51□□□□□ -1.85
PEX28P38848 YDL211CYDL211C 1119 nt3.51□□□□□ -1.85
PEX28P38848 YGR069WYGR069W 336 nt3.51□□□□□ -1.85
PEX28P38848 SMA2YML066C 1110 nt3.51□□□□□ -1.85
PEX28P38848 STE6YKL209C 3873 nt3.5□□□□□ -1.85
PEX28P38848 FUS1YCL027W 1539 nt3.5□□□□□ -1.85
PEX28P38848 NUP159YIL115C 4383 nt3.5□□□□□ -1.85
PEX28P38848 TLC1TLC1 1301 nt3.5□□□□□ -1.85
PEX28P38848 AIM9YER080W 1884 nt3.5□□□□□ -1.85
PEX28P38848 snR79snR79 84 nt3.5□□□□□ -1.85
PEX28P38848 GPI14YJR013W 1212 nt3.5□□□□□ -1.85
PEX28P38848 MGR1YCL044C 1254 nt3.5□□□□□ -1.85
PEX28P38848 RAD5YLR032W 3510 nt3.49□□□□□ -1.85
PEX28P38848 RPN2YIL075C 2838 nt3.49□□□□□ -1.85
PEX28P38848 Q0092Q0092 141 nt3.49□□□□□ -1.85
PEX28P38848 YJL020W-AYJL020W-A 258 nt3.49□□□□□ -1.85
PEX28P38848 YNL198CYNL198C 303 nt3.49□□□□□ -1.85
PEX28P38848 TOM70YNL121C 1854 nt3.49□□□□□ -1.85
PEX28P38848 BNA4YBL098W 1383 nt3.49□□□□□ -1.85
PEX28P38848 CHD1YER164W 4407 nt3.49□□□□□ -1.85
PEX28P38848 ECM25YJL201W 1800 nt3.49□□□□□ -1.85
PEX28P38848 EXO84YBR102C 2262 nt3.49□□□□□ -1.85
PEX28P38848 RAD26YJR035W 3258 nt3.48□□□□□ -1.85
PEX28P38848 NOP4YPL043W 2058 nt3.48□□□□□ -1.85
PEX28P38848 YHR214C-EYHR214C-E 300 nt3.48□□□□□ -1.85
PEX28P38848 COA4YLR218C 453 nt3.48□□□□□ -1.85
PEX28P38848 YGL140CYGL140C 3660 nt3.48□□□□□ -1.85
PEX28P38848 PRP22YER013W 3438 nt3.48□□□□□ -1.85
PEX28P38848 STU1YBL034C 4542 nt3.47□□□□□ -1.85
PEX28P38848 YDR210W-BYDR210W-B 5313 nt3.47□□□□□ -1.85
PEX28P38848 YDR261W-BYDR261W-B 5313 nt3.47□□□□□ -1.85
PEX28P38848 YFL002W-AYFL002W-A 5313 nt3.47□□□□□ -1.85
PEX28P38848 YGR161W-BYGR161W-B 5313 nt3.47□□□□□ -1.85
PEX28P38848 YLR410W-BYLR410W-B 5313 nt3.47□□□□□ -1.85
PEX28P38848 YCL019WYCL019W 5313 nt3.47□□□□□ -1.85
PEX28P38848 POM152YMR129W 4014 nt3.47□□□□□ -1.85
PEX28P38848 MSR1YHR091C 1932 nt3.47□□□□□ -1.85
PEX28P38848 YJL197C-AYJL197C-A 282 nt3.47□□□□□ -1.85
PEX28P38848 YLR012CYLR012C 300 nt3.47□□□□□ -1.85
PEX28P38848 RPL20BYOR312C 519 nt3.47□□□□□ -1.85
PEX28P38848 SWH1YAR042W 3567 nt3.46□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms