Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
HMGCLP35914 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
HMGCLP35914 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
HMGCLP35914 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HMGCLP35914 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGCLP35914 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGCLP35914 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGCLP35914 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HMGCLP35914 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGCLP35914 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGCLP35914 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.4■□□□□ 0.86
HMGCLP35914 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCLP35914 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCLP35914 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
HMGCLP35914 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
HMGCLP35914 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HMGCLP35914 MKRN4P-201ENST00000444706 1521 ntBASIC20.39■□□□□ 0.85
HMGCLP35914 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.39■□□□□ 0.85
HMGCLP35914 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 KRT8P36-201ENST00000489121 1440 ntBASIC20.39■□□□□ 0.85
HMGCLP35914 GPX1P1-201ENST00000388829 606 ntBASIC20.39■□□□□ 0.85
HMGCLP35914 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.39■□□□□ 0.85
HMGCLP35914 AL356652.1-201ENST00000615962 565 ntBASIC20.39■□□□□ 0.85
HMGCLP35914 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCLP35914 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCLP35914 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGCLP35914 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGCLP35914 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HMGCLP35914 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGCLP35914 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCLP35914 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCLP35914 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HMGCLP35914 KRT18P68-201ENST00000392293 1000 ntBASIC20.38■□□□□ 0.85
HMGCLP35914 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCLP35914 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.38■□□□□ 0.85
HMGCLP35914 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGCLP35914 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGCLP35914 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCLP35914 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGCLP35914 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGCLP35914 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HMGCLP35914 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCLP35914 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCLP35914 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HMGCLP35914 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGCLP35914 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGCLP35914 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
HMGCLP35914 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HMGCLP35914 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HMGCLP35914 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.37■□□□□ 0.85
HMGCLP35914 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.37■□□□□ 0.85
HMGCLP35914 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.37■□□□□ 0.85
HMGCLP35914 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCLP35914 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HMGCLP35914 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.36■□□□□ 0.85
HMGCLP35914 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HMGCLP35914 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
HMGCLP35914 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.36■□□□□ 0.85
HMGCLP35914 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGCLP35914 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 TSPY6P-201ENST00000448518 926 ntBASIC20.36■□□□□ 0.85
HMGCLP35914 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms