Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 YCR081C-AYCR081C-A 237 nt3.39□□□□□ -1.87
DEF1P35732 YER091C-AYER091C-A 222 nt3.39□□□□□ -1.87
DEF1P35732 RPS8AYBL072C 603 nt3.39□□□□□ -1.87
DEF1P35732 YPL238CYPL238C 390 nt3.39□□□□□ -1.87
DEF1P35732 CAF120YNL278W 3183 nt3.39□□□□□ -1.87
DEF1P35732 NET1YJL076W 3570 nt3.38□□□□□ -1.87
DEF1P35732 MSH4YFL003C 2637 nt3.38□□□□□ -1.87
DEF1P35732 HTA1YDR225W 399 nt3.38□□□□□ -1.87
DEF1P35732 FMP32YFL046W 624 nt3.38□□□□□ -1.87
DEF1P35732 YFR056CYFR056C 369 nt3.38□□□□□ -1.87
DEF1P35732 LSM2YBL026W 288 nt3.38□□□□□ -1.87
DEF1P35732 YNL170WYNL170W 396 nt3.38□□□□□ -1.87
DEF1P35732 RFC3YNL290W 1023 nt3.38□□□□□ -1.87
DEF1P35732 PFY1YOR122C 381 nt3.38□□□□□ -1.87
DEF1P35732 MET6YER091C 2304 nt3.38□□□□□ -1.87
DEF1P35732 YKL222CYKL222C 2118 nt3.38□□□□□ -1.87
DEF1P35732 YSW1YBR148W 1830 nt3.37□□□□□ -1.87
DEF1P35732 SNX41YDR425W 1878 nt3.37□□□□□ -1.87
DEF1P35732 ERG28YER044C 447 nt3.37□□□□□ -1.87
DEF1P35732 YER066C-AYER066C-A 501 nt3.37□□□□□ -1.87
DEF1P35732 APQ12YIL040W 417 nt3.37□□□□□ -1.87
DEF1P35732 YIL066W-AYIL066W-A 444 nt3.37□□□□□ -1.87
DEF1P35732 ABF2YMR072W 552 nt3.37□□□□□ -1.87
DEF1P35732 YBL073WYBL073W 312 nt3.37□□□□□ -1.87
DEF1P35732 YPL080CYPL080C 327 nt3.37□□□□□ -1.87
DEF1P35732 snR42snR42 351 nt3.37□□□□□ -1.87
DEF1P35732 SLM6YBR266C 453 nt3.37□□□□□ -1.87
DEF1P35732 YKL100CYKL100C 1764 nt3.37□□□□□ -1.87
DEF1P35732 UBP14YBR058C 2346 nt3.37□□□□□ -1.87
DEF1P35732 SLA1YBL007C 3735 nt3.36□□□□□ -1.87
DEF1P35732 PBS2YJL128C 2007 nt3.36□□□□□ -1.87
DEF1P35732 VHR2YER064C 1518 nt3.36□□□□□ -1.87
DEF1P35732 YGL149WYGL149W 306 nt3.36□□□□□ -1.87
DEF1P35732 RPA34YJL148W 702 nt3.36□□□□□ -1.87
DEF1P35732 YLR416CYLR416C 399 nt3.36□□□□□ -1.87
DEF1P35732 RPL9BYNL067W 576 nt3.36□□□□□ -1.87
DEF1P35732 YOR011W-AYOR011W-A 207 nt3.36□□□□□ -1.87
DEF1P35732 LCL1YPL056C 306 nt3.36□□□□□ -1.87
DEF1P35732 LTP1YPR073C 486 nt3.36□□□□□ -1.87
DEF1P35732 MSH2YOL090W 2895 nt3.36□□□□□ -1.87
DEF1P35732 PSK1YAL017W 4071 nt3.35□□□□□ -1.87
DEF1P35732 PHO81YGR233C 3537 nt3.35□□□□□ -1.87
DEF1P35732 EXO84YBR102C 2262 nt3.35□□□□□ -1.87
DEF1P35732 REG1YDR028C 3045 nt3.35□□□□□ -1.87
DEF1P35732 RPC10YHR143W-A 213 nt3.35□□□□□ -1.87
DEF1P35732 PAU14YIL176C 363 nt3.35□□□□□ -1.87
DEF1P35732 PAU1YJL223C 363 nt3.35□□□□□ -1.87
DEF1P35732 TMA10YLR327C 261 nt3.35□□□□□ -1.87
DEF1P35732 YLR458WYLR458W 381 nt3.35□□□□□ -1.87
DEF1P35732 PRE8YML092C 753 nt3.35□□□□□ -1.87
DEF1P35732 ALG8YOR067C 1734 nt3.35□□□□□ -1.87
DEF1P35732 SPP382YLR424W 2127 nt3.35□□□□□ -1.87
DEF1P35732 SOK1YDR006C 2706 nt3.35□□□□□ -1.87
DEF1P35732 SNF12YNR023W 1701 nt3.34□□□□□ -1.87
DEF1P35732 YDL211CYDL211C 1119 nt3.34□□□□□ -1.87
DEF1P35732 INN1YNL152W 1230 nt3.34□□□□□ -1.87
DEF1P35732 IES4YOR189W 351 nt3.34□□□□□ -1.87
DEF1P35732 EGD1YPL037C 474 nt3.34□□□□□ -1.87
DEF1P35732 SRP68YPL243W 1800 nt3.34□□□□□ -1.87
DEF1P35732 MMS1YPR164W 4224 nt3.34□□□□□ -1.88
DEF1P35732 YDR239CYDR239C 2364 nt3.33□□□□□ -1.88
DEF1P35732 PEX5YDR244W 1839 nt3.33□□□□□ -1.88
DEF1P35732 URM1YIL008W 300 nt3.33□□□□□ -1.88
DEF1P35732 PSY1YKL076C 384 nt3.33□□□□□ -1.88
DEF1P35732 YKL111CYKL111C 336 nt3.33□□□□□ -1.88
DEF1P35732 SDH2YLL041C 801 nt3.33□□□□□ -1.88
DEF1P35732 RPL22AYLR061W 366 nt3.33□□□□□ -1.88
DEF1P35732 RPL20AYMR242C 519 nt3.33□□□□□ -1.88
DEF1P35732 snR49snR49 165 nt3.33□□□□□ -1.88
DEF1P35732 SSP1YHR184W 1716 nt3.33□□□□□ -1.88
DEF1P35732 PCF11YDR228C 1881 nt3.33□□□□□ -1.88
DEF1P35732 TOM1YDR457W 9807 nt3.32□□□□□ -1.88
DEF1P35732 PSF1YDR013W 627 nt3.32□□□□□ -1.88
DEF1P35732 YDR344CYDR344C 444 nt3.32□□□□□ -1.88
DEF1P35732 IRC4YDR540C 540 nt3.32□□□□□ -1.88
DEF1P35732 YEL018C-AYEL018C-A 534 nt3.32□□□□□ -1.88
DEF1P35732 HPA3YEL066W 540 nt3.32□□□□□ -1.88
DEF1P35732 RPS26BYER131W 360 nt3.32□□□□□ -1.88
DEF1P35732 RAD6YGL058W 519 nt3.32□□□□□ -1.88
DEF1P35732 NFT1YKR103W 3657 nt3.32□□□□□ -1.88
DEF1P35732 MET5YJR137C 4329 nt3.31□□□□□ -1.88
DEF1P35732 UTP14YML093W 2700 nt3.31□□□□□ -1.88
DEF1P35732 YDR061WYDR061W 1620 nt3.31□□□□□ -1.88
DEF1P35732 ARP7YPR034W 1434 nt3.31□□□□□ -1.88
DEF1P35732 YER188C-AYER188C-A 300 nt3.31□□□□□ -1.88
DEF1P35732 PAU13YHL046C 363 nt3.31□□□□□ -1.88
DEF1P35732 BCD1YHR040W 1101 nt3.31□□□□□ -1.88
DEF1P35732 BAT1YHR208W 1182 nt3.31□□□□□ -1.88
DEF1P35732 YJR023CYJR023C 402 nt3.31□□□□□ -1.88
DEF1P35732 RPL8BYLL045C 771 nt3.31□□□□□ -1.88
DEF1P35732 RPL37AYLR185W 267 nt3.31□□□□□ -1.88
DEF1P35732 ESC1YMR219W 4977 nt3.31□□□□□ -1.88
DEF1P35732 YIL169CYIL169C 2988 nt3.31□□□□□ -1.88
DEF1P35732 ATP22YDR350C 2055 nt3.31□□□□□ -1.88
DEF1P35732 SRB4YER022W 2064 nt3.31□□□□□ -1.88
DEF1P35732 ARG5,6YER069W 2592 nt3.3□□□□□ -1.88
DEF1P35732 snR85snR85 171 nt3.3□□□□□ -1.88
DEF1P35732 TIF35YDR429C 825 nt3.3□□□□□ -1.88
DEF1P35732 HYP2YEL034W 474 nt3.3□□□□□ -1.88
DEF1P35732 RPL29YFR032C-A 180 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 54.3 ms