Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A4P31645 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SLC6A4P31645 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SLC6A4P31645 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A4P31645 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC6A4P31645 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC6A4P31645 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SLC6A4P31645 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.06■□□□□ 0.96
SLC6A4P31645 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC6A4P31645 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC6A4P31645 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC6A4P31645 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SLC6A4P31645 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A4P31645 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC6A4P31645 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A4P31645 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC6A4P31645 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A4P31645 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC6A4P31645 ABHD17AP1-201ENST00000358206 933 ntBASIC21.05■□□□□ 0.96
SLC6A4P31645 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A4P31645 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC6A4P31645 TSPY20P-201ENST00000450910 630 ntBASIC21.05■□□□□ 0.96
SLC6A4P31645 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SLC6A4P31645 MIR2861-201ENST00000636310 90 ntBASIC21.05■□□□□ 0.96
SLC6A4P31645 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A4P31645 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC6A4P31645 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A4P31645 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A4P31645 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
SLC6A4P31645 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
SLC6A4P31645 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SLC6A4P31645 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SLC6A4P31645 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SLC6A4P31645 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A4P31645 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC6A4P31645 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC6A4P31645 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC6A4P31645 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC6A4P31645 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC6A4P31645 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SLC6A4P31645 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC6A4P31645 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC6A4P31645 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC6A4P31645 PGM5P4-201ENST00000421970 445 ntBASIC21.03■□□□□ 0.96
SLC6A4P31645 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC6A4P31645 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC6A4P31645 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC6A4P31645 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A4P31645 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A4P31645 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A4P31645 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SLC6A4P31645 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A4P31645 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A4P31645 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A4P31645 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A4P31645 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC6A4P31645 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SLC6A4P31645 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SLC6A4P31645 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SLC6A4P31645 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.02■□□□□ 0.95
SLC6A4P31645 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
SLC6A4P31645 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SLC6A4P31645 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC6A4P31645 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC6A4P31645 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC6A4P31645 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SLC6A4P31645 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms