Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL355472.2-201ENST00000422958 438 ntBASIC18.87■□□□□ 0.61
ABCD3P28288 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCD3P28288 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.87■□□□□ 0.61
ABCD3P28288 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.87■□□□□ 0.61
ABCD3P28288 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.87■□□□□ 0.61
ABCD3P28288 CYP2T3P-201ENST00000601990 817 ntBASIC18.87■□□□□ 0.61
ABCD3P28288 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCD3P28288 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
ABCD3P28288 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCD3P28288 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCD3P28288 AC087633.2-202ENST00000565166 1439 ntBASIC18.86■□□□□ 0.61
ABCD3P28288 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.86■□□□□ 0.61
ABCD3P28288 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.86■□□□□ 0.61
ABCD3P28288 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.86■□□□□ 0.61
ABCD3P28288 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCD3P28288 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
ABCD3P28288 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCD3P28288 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCD3P28288 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ABCD3P28288 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCD3P28288 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCD3P28288 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCD3P28288 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCD3P28288 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCD3P28288 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.85■□□□□ 0.61
ABCD3P28288 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.85■□□□□ 0.61
ABCD3P28288 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCD3P28288 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCD3P28288 MIPEPP3-201ENST00000412105 444 ntBASIC18.85■□□□□ 0.61
ABCD3P28288 BX276092.2-201ENST00000417668 665 ntBASIC18.85■□□□□ 0.61
ABCD3P28288 PGM5P4-201ENST00000421970 445 ntBASIC18.85■□□□□ 0.61
ABCD3P28288 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
ABCD3P28288 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCD3P28288 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCD3P28288 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.85■□□□□ 0.61
ABCD3P28288 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ABCD3P28288 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCD3P28288 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCD3P28288 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCD3P28288 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCD3P28288 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 KRT18P68-201ENST00000392293 1000 ntBASIC18.84■□□□□ 0.61
ABCD3P28288 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCD3P28288 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
ABCD3P28288 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.84■□□□□ 0.61
ABCD3P28288 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCD3P28288 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
ABCD3P28288 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ABCD3P28288 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
ABCD3P28288 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCD3P28288 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCD3P28288 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ABCD3P28288 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ABCD3P28288 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCD3P28288 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCD3P28288 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ABCD3P28288 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ABCD3P28288 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.83■□□□□ 0.6
ABCD3P28288 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCD3P28288 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCD3P28288 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.83■□□□□ 0.6
ABCD3P28288 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.83■□□□□ 0.6
ABCD3P28288 MIR2861-201ENST00000636310 90 ntBASIC18.83■□□□□ 0.6
ABCD3P28288 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCD3P28288 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.83■□□□□ 0.6
ABCD3P28288 KRT17P1-201ENST00000399211 1546 ntBASIC18.83■□□□□ 0.6
ABCD3P28288 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCD3P28288 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.83■□□□□ 0.6
ABCD3P28288 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCD3P28288 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.83■□□□□ 0.6
ABCD3P28288 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCD3P28288 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCD3P28288 FP700111.2-201ENST00000619190 1892 ntBASIC18.82■□□□□ 0.6
ABCD3P28288 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
ABCD3P28288 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCD3P28288 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCD3P28288 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCD3P28288 AL355802.2-201ENST00000402069 882 ntBASIC18.82■□□□□ 0.6
ABCD3P28288 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms