Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 tQ(UUG)HtQ(UUG)H 72 nt4.73□□□□□ -1.65
SPB4P25808 tQ(UUG)LtQ(UUG)L 72 nt4.73□□□□□ -1.65
SPB4P25808 RPL40AYIL148W 387 nt4.73□□□□□ -1.65
SPB4P25808 YML116W-AYML116W-A 303 nt4.73□□□□□ -1.65
SPB4P25808 TRM7YBR061C 933 nt4.73□□□□□ -1.65
SPB4P25808 YBR137WYBR137W 540 nt4.73□□□□□ -1.65
SPB4P25808 ECM5YMR176W 4236 nt4.73□□□□□ -1.65
SPB4P25808 CWH43YCR017C 2862 nt4.72□□□□□ -1.65
SPB4P25808 ARO80YDR421W 2853 nt4.72□□□□□ -1.65
SPB4P25808 ECM25YJL201W 1800 nt4.72□□□□□ -1.65
SPB4P25808 RPS17BYDR447C 411 nt4.72□□□□□ -1.65
SPB4P25808 IGO2YHR132W-A 396 nt4.72□□□□□ -1.65
SPB4P25808 ATP15YPL271W 189 nt4.72□□□□□ -1.65
SPB4P25808 HOS3YPL116W 2094 nt4.72□□□□□ -1.65
SPB4P25808 PTA1YAL043C 2358 nt4.72□□□□□ -1.65
SPB4P25808 NPR1YNL183C 2373 nt4.72□□□□□ -1.65
SPB4P25808 DOA4YDR069C 2781 nt4.72□□□□□ -1.65
SPB4P25808 BRE4YDL231C 3378 nt4.72□□□□□ -1.65
SPB4P25808 ULS1YOR191W 4860 nt4.72□□□□□ -1.65
SPB4P25808 POM152YMR129W 4014 nt4.71□□□□□ -1.66
SPB4P25808 YMR31YFR049W 372 nt4.71□□□□□ -1.66
SPB4P25808 TIM13YGR181W 318 nt4.71□□□□□ -1.66
SPB4P25808 RDN5-1RDN5-1 121 nt4.71□□□□□ -1.66
SPB4P25808 RDN5-6RDN5-6 121 nt4.71□□□□□ -1.66
SPB4P25808 PEP5YMR231W 3090 nt4.71□□□□□ -1.66
SPB4P25808 NSP1YJL041W 2472 nt4.7□□□□□ -1.66
SPB4P25808 YIL032CYIL032C 357 nt4.7□□□□□ -1.66
SPB4P25808 LSM1YJL124C 519 nt4.7□□□□□ -1.66
SPB4P25808 YMR172C-AYMR172C-A 384 nt4.7□□□□□ -1.66
SPB4P25808 LEU3YLR451W 2661 nt4.7□□□□□ -1.66
SPB4P25808 VPS3YDR495C 3036 nt4.7□□□□□ -1.66
SPB4P25808 YNR065CYNR065C 3351 nt4.7□□□□□ -1.66
SPB4P25808 TCO89YPL180W 2400 nt4.7□□□□□ -1.66
SPB4P25808 SNF2YOR290C 5112 nt4.69□□□□□ -1.66
SPB4P25808 DIS3YOL021C 3006 nt4.69□□□□□ -1.66
SPB4P25808 snR79snR79 84 nt4.69□□□□□ -1.66
SPB4P25808 RPL14AYKL006W 417 nt4.69□□□□□ -1.66
SPB4P25808 YRM1YOR172W 2361 nt4.69□□□□□ -1.66
SPB4P25808 TCP1YDR212W 1680 nt4.68□□□□□ -1.66
SPB4P25808 TRS65YGR166W 1683 nt4.68□□□□□ -1.66
SPB4P25808 YLR342W-AYLR342W-A 174 nt4.68□□□□□ -1.66
SPB4P25808 MCD4YKL165C 2760 nt4.67□□□□□ -1.66
SPB4P25808 snR55snR55 98 nt4.67□□□□□ -1.66
SPB4P25808 YLR053CYLR053C 327 nt4.67□□□□□ -1.66
SPB4P25808 IKI3YLR384C 4050 nt4.67□□□□□ -1.66
SPB4P25808 PIM1YBL022C 3402 nt4.67□□□□□ -1.66
SPB4P25808 NPR2YEL062W 1848 nt4.67□□□□□ -1.66
SPB4P25808 MIS1YBR084W 2928 nt4.66□□□□□ -1.66
SPB4P25808 RAD5YLR032W 3510 nt4.66□□□□□ -1.66
SPB4P25808 USA1YML029W 2517 nt4.66□□□□□ -1.66
SPB4P25808 YNL170WYNL170W 396 nt4.66□□□□□ -1.66
SPB4P25808 MSH2YOL090W 2895 nt4.66□□□□□ -1.66
SPB4P25808 ETP1YHL010C 1758 nt4.65□□□□□ -1.66
SPB4P25808 YDL185C-AYDL185C-A 228 nt4.65□□□□□ -1.67
SPB4P25808 TMA108YIL137C 2841 nt4.65□□□□□ -1.67
SPB4P25808 RPL36AYMR194W 303 nt4.64□□□□□ -1.67
SPB4P25808 YNL338WYNL338W 159 nt4.64□□□□□ -1.67
SPB4P25808 YBR197CYBR197C 654 nt4.64□□□□□ -1.67
SPB4P25808 RPB2YOR151C 3675 nt4.64□□□□□ -1.67
SPB4P25808 LOS1YKL205W 3303 nt4.63□□□□□ -1.67
SPB4P25808 ZDS1YMR273C 2748 nt4.63□□□□□ -1.67
SPB4P25808 COG3YER157W 2406 nt4.63□□□□□ -1.67
SPB4P25808 SMC2YFR031C 3513 nt4.63□□□□□ -1.67
SPB4P25808 SYT1YPR095C 3681 nt4.62□□□□□ -1.67
SPB4P25808 TRK1YJL129C 3708 nt4.62□□□□□ -1.67
SPB4P25808 JEN1YKL217W 1851 nt4.62□□□□□ -1.67
SPB4P25808 MVP1YMR004W 1536 nt4.62□□□□□ -1.67
SPB4P25808 RIM20YOR275C 1986 nt4.62□□□□□ -1.67
SPB4P25808 SKT5YBL061C 2091 nt4.61□□□□□ -1.67
SPB4P25808 TAF2YCR042C 4224 nt4.61□□□□□ -1.67
SPB4P25808 YIL166CYIL166C 1629 nt4.61□□□□□ -1.67
SPB4P25808 SHH3YMR118C 591 nt4.61□□□□□ -1.67
SPB4P25808 HHT1YBR010W 411 nt4.61□□□□□ -1.67
SPB4P25808 YPR146CYPR146C 330 nt4.61□□□□□ -1.67
SPB4P25808 SSE1YPL106C 2082 nt4.61□□□□□ -1.67
SPB4P25808 TAF7YMR227C 1773 nt4.6□□□□□ -1.67
SPB4P25808 SEC15YGL233W 2733 nt4.6□□□□□ -1.67
SPB4P25808 SRO7YPR032W 3102 nt4.6□□□□□ -1.67
SPB4P25808 SPC19YDR201W 498 nt4.6□□□□□ -1.67
SPB4P25808 YGL052WYGL052W 306 nt4.6□□□□□ -1.67
SPB4P25808 GPG1YGL121C 381 nt4.6□□□□□ -1.67
SPB4P25808 YGR051CYGR051C 324 nt4.6□□□□□ -1.67
SPB4P25808 RPS23AYGR118W 438 nt4.6□□□□□ -1.67
SPB4P25808 YHR032C-AYHR032C-A 120 nt4.6□□□□□ -1.67
SPB4P25808 YLR352WYLR352W 2424 nt4.6□□□□□ -1.67
SPB4P25808 SEG1YMR086W 2883 nt4.59□□□□□ -1.67
SPB4P25808 PHM6YDR281C 315 nt4.59□□□□□ -1.67
SPB4P25808 RPL20BYOR312C 519 nt4.59□□□□□ -1.67
SPB4P25808 SRP72YPL210C 1923 nt4.59□□□□□ -1.67
SPB4P25808 YPR063CYPR063C 423 nt4.59□□□□□ -1.67
SPB4P25808 SHQ1YIL104C 1524 nt4.58□□□□□ -1.68
SPB4P25808 YDR230WYDR230W 348 nt4.58□□□□□ -1.68
SPB4P25808 PHS1YJL097W 654 nt4.58□□□□□ -1.68
SPB4P25808 RPL38YLR325C 237 nt4.58□□□□□ -1.68
SPB4P25808 RAD4YER162C 2265 nt4.58□□□□□ -1.68
SPB4P25808 GCD6YDR211W 2139 nt4.58□□□□□ -1.68
SPB4P25808 KEL2YGR238C 2649 nt4.58□□□□□ -1.68
SPB4P25808 GLC3YEL011W 2115 nt4.57□□□□□ -1.68
SPB4P25808 RNR1YER070W 2667 nt4.57□□□□□ -1.68
SPB4P25808 REC104YHR157W 549 nt4.57□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 41.7 ms