Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPH2P23942 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPH2P23942 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPH2P23942 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPH2P23942 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.51■□□□□ 0.71
PRPH2P23942 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.51■□□□□ 0.71
PRPH2P23942 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPH2P23942 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPH2P23942 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PRPH2P23942 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.5■□□□□ 0.71
PRPH2P23942 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPH2P23942 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPH2P23942 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PRPH2P23942 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.5■□□□□ 0.71
PRPH2P23942 UBE2DNL-204ENST00000602536 740 ntBASIC19.5■□□□□ 0.71
PRPH2P23942 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRPH2P23942 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRPH2P23942 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPH2P23942 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPH2P23942 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPH2P23942 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.5■□□□□ 0.71
PRPH2P23942 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPH2P23942 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.49■□□□□ 0.71
PRPH2P23942 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PRPH2P23942 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPH2P23942 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPH2P23942 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.49■□□□□ 0.71
PRPH2P23942 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPH2P23942 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPH2P23942 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRPH2P23942 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.49■□□□□ 0.71
PRPH2P23942 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.49■□□□□ 0.71
PRPH2P23942 CDV3P1-201ENST00000471403 739 ntBASIC19.49■□□□□ 0.71
PRPH2P23942 FAM21FP-204ENST00000608637 956 ntBASIC19.49■□□□□ 0.71
PRPH2P23942 MYCNOS-205ENST00000641950 531 ntBASIC19.49■□□□□ 0.71
PRPH2P23942 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPH2P23942 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRPH2P23942 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPH2P23942 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.49■□□□□ 0.71
PRPH2P23942 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
PRPH2P23942 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPH2P23942 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRPH2P23942 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PRPH2P23942 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PRPH2P23942 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PRPH2P23942 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.48■□□□□ 0.71
PRPH2P23942 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.48■□□□□ 0.71
PRPH2P23942 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
PRPH2P23942 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.48■□□□□ 0.71
PRPH2P23942 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PRPH2P23942 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.48■□□□□ 0.71
PRPH2P23942 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.48■□□□□ 0.71
PRPH2P23942 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PRPH2P23942 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.48■□□□□ 0.71
PRPH2P23942 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PRPH2P23942 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPH2P23942 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.48■□□□□ 0.71
PRPH2P23942 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PRPH2P23942 TCF3P1-201ENST00000423021 1937 ntBASIC19.47■□□□□ 0.71
PRPH2P23942 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.47■□□□□ 0.71
PRPH2P23942 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PRPH2P23942 AC097381.1-201ENST00000429019 1296 ntBASIC19.47■□□□□ 0.71
PRPH2P23942 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.47■□□□□ 0.71
PRPH2P23942 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.47■□□□□ 0.71
PRPH2P23942 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPH2P23942 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.46■□□□□ 0.71
PRPH2P23942 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.46■□□□□ 0.71
PRPH2P23942 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PRPH2P23942 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.46■□□□□ 0.71
PRPH2P23942 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPH2P23942 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms