Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNA3P22001 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNA3P22001 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
KCNA3P22001 TERF1P1-201ENST00000311003 1181 ntBASIC25.36■■□□□ 1.65
KCNA3P22001 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
KCNA3P22001 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
KCNA3P22001 AL390719.1-204ENST00000412397 1219 ntBASIC25.36■■□□□ 1.65
KCNA3P22001 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.36■■□□□ 1.65
KCNA3P22001 AC104076.2-201ENST00000448912 469 ntBASIC25.36■■□□□ 1.65
KCNA3P22001 KRT16P5-201ENST00000455284 522 ntBASIC25.36■■□□□ 1.65
KCNA3P22001 CFL2-205ENST00000555765 632 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNA3P22001 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.36■■□□□ 1.65
KCNA3P22001 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNA3P22001 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.36■■□□□ 1.65
KCNA3P22001 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNA3P22001 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNA3P22001 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.36■■□□□ 1.65
KCNA3P22001 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNA3P22001 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.36■■□□□ 1.65
KCNA3P22001 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNA3P22001 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
KCNA3P22001 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNA3P22001 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNA3P22001 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.35■■□□□ 1.65
KCNA3P22001 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
KCNA3P22001 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.35■■□□□ 1.65
KCNA3P22001 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.35■■□□□ 1.65
KCNA3P22001 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.35■■□□□ 1.65
KCNA3P22001 NTF6B-201ENST00000591913 560 ntBASIC25.35■■□□□ 1.65
KCNA3P22001 AP000525.1-201ENST00000608286 694 ntBASIC25.35■■□□□ 1.65
KCNA3P22001 REXO1L10P-201ENST00000615707 1290 ntBASIC25.35■■□□□ 1.65
KCNA3P22001 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.35■■□□□ 1.65
KCNA3P22001 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KCNA3P22001 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNA3P22001 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
KCNA3P22001 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNA3P22001 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.35■■□□□ 1.65
KCNA3P22001 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.35■■□□□ 1.65
KCNA3P22001 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNA3P22001 CYP2D8P-201ENST00000433633 1490 ntBASIC25.34■■□□□ 1.65
KCNA3P22001 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNA3P22001 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNA3P22001 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNA3P22001 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
KCNA3P22001 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.34■■□□□ 1.65
KCNA3P22001 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KCNA3P22001 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNA3P22001 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNA3P22001 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNA3P22001 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.34■■□□□ 1.65
KCNA3P22001 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
KCNA3P22001 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNA3P22001 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNA3P22001 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNA3P22001 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNA3P22001 LINC01568-207ENST00000641790 1380 ntBASIC25.33■■□□□ 1.65
KCNA3P22001 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNA3P22001 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNA3P22001 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.33■■□□□ 1.65
KCNA3P22001 NUDT16P1-203ENST00000513809 620 ntBASIC25.33■■□□□ 1.65
KCNA3P22001 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.33■■□□□ 1.65
KCNA3P22001 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.33■■□□□ 1.65
KCNA3P22001 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNA3P22001 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNA3P22001 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNA3P22001 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNA3P22001 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNA3P22001 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
KCNA3P22001 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNA3P22001 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.32■■□□□ 1.64
KCNA3P22001 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.32■■□□□ 1.64
KCNA3P22001 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.32■■□□□ 1.64
KCNA3P22001 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25.32■■□□□ 1.64
KCNA3P22001 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
KCNA3P22001 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.32■■□□□ 1.64
KCNA3P22001 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.32■■□□□ 1.64
KCNA3P22001 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KCNA3P22001 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.32■■□□□ 1.64
KCNA3P22001 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
KCNA3P22001 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNA3P22001 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNA3P22001 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.31■■□□□ 1.64
KCNA3P22001 DUX4L26-201ENST00000489078 1255 ntBASIC25.31■■□□□ 1.64
KCNA3P22001 AC073195.1-201ENST00000607241 877 ntBASIC25.31■■□□□ 1.64
KCNA3P22001 AL121829.2-201ENST00000620908 328 ntBASIC25.31■■□□□ 1.64
KCNA3P22001 AC010947.1-201ENST00000623454 693 ntBASIC25.31■■□□□ 1.64
KCNA3P22001 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
KCNA3P22001 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KCNA3P22001 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KCNA3P22001 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.3■■□□□ 1.64
KCNA3P22001 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNA3P22001 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.3■■□□□ 1.64
KCNA3P22001 UNC93B2-201ENST00000285383 730 ntBASIC25.3■■□□□ 1.64
KCNA3P22001 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNA3P22001 MIR1238-201ENST00000408483 83 ntBASIC25.3■■□□□ 1.64
KCNA3P22001 AL353807.1-201ENST00000427475 662 ntBASIC25.3■■□□□ 1.64
KCNA3P22001 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.3■■□□□ 1.64
KCNA3P22001 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNA3P22001 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.3■■□□□ 1.64
KCNA3P22001 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms