Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NFKB1P19838 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NFKB1P19838 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NFKB1P19838 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NFKB1P19838 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.83■□□□□ 0.93
NFKB1P19838 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
NFKB1P19838 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NFKB1P19838 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NFKB1P19838 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NFKB1P19838 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.83■□□□□ 0.93
NFKB1P19838 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.83■□□□□ 0.93
NFKB1P19838 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
NFKB1P19838 MIR2861-201ENST00000636310 90 ntBASIC20.83■□□□□ 0.93
NFKB1P19838 AC013268.1-206ENST00000638368 961 ntBASIC20.83■□□□□ 0.93
NFKB1P19838 AC112229.1-201ENST00000639295 961 ntBASIC20.83■□□□□ 0.93
NFKB1P19838 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NFKB1P19838 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.83■□□□□ 0.92
NFKB1P19838 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.83■□□□□ 0.92
NFKB1P19838 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NFKB1P19838 AC020907.5-201ENST00000624372 1936 ntBASIC20.82■□□□□ 0.92
NFKB1P19838 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.82■□□□□ 0.92
NFKB1P19838 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NFKB1P19838 AC007322.4-201ENST00000509611 723 ntBASIC20.82■□□□□ 0.92
NFKB1P19838 DUX4L16-201ENST00000555130 1264 ntBASIC20.82■□□□□ 0.92
NFKB1P19838 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.82■□□□□ 0.92
NFKB1P19838 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.82■□□□□ 0.92
NFKB1P19838 AL591742.1-201ENST00000604433 565 ntBASIC20.82■□□□□ 0.92
NFKB1P19838 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.82■□□□□ 0.92
NFKB1P19838 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NFKB1P19838 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NFKB1P19838 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKB1P19838 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKB1P19838 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NFKB1P19838 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKB1P19838 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NFKB1P19838 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.81■□□□□ 0.92
NFKB1P19838 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NFKB1P19838 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NFKB1P19838 CNN2P6-201ENST00000439038 900 ntBASIC20.81■□□□□ 0.92
NFKB1P19838 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.81■□□□□ 0.92
NFKB1P19838 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.81■□□□□ 0.92
NFKB1P19838 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NFKB1P19838 BID-214ENST00000617586 542 ntTSL 5 BASIC20.81■□□□□ 0.92
NFKB1P19838 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
NFKB1P19838 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKB1P19838 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.81■□□□□ 0.92
NFKB1P19838 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NFKB1P19838 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKB1P19838 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKB1P19838 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.8■□□□□ 0.92
NFKB1P19838 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
NFKB1P19838 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKB1P19838 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.8■□□□□ 0.92
NFKB1P19838 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKB1P19838 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NFKB1P19838 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKB1P19838 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKB1P19838 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.8■□□□□ 0.92
NFKB1P19838 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.8■□□□□ 0.92
NFKB1P19838 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NFKB1P19838 AC016405.3-201ENST00000607710 860 ntBASIC20.8■□□□□ 0.92
NFKB1P19838 AC073130.3-201ENST00000624389 2278 ntBASIC20.8■□□□□ 0.92
NFKB1P19838 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.8■□□□□ 0.92
NFKB1P19838 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKB1P19838 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB1P19838 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.79■□□□□ 0.92
NFKB1P19838 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB1P19838 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB1P19838 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB1P19838 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB1P19838 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.79■□□□□ 0.92
NFKB1P19838 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB1P19838 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.79■□□□□ 0.92
NFKB1P19838 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB1P19838 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.79■□□□□ 0.92
NFKB1P19838 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.79■□□□□ 0.92
NFKB1P19838 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.79■□□□□ 0.92
NFKB1P19838 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NFKB1P19838 FAM21FP-204ENST00000608637 956 ntBASIC20.79■□□□□ 0.92
NFKB1P19838 IKBKGP1-201ENST00000612193 1073 ntBASIC20.79■□□□□ 0.92
NFKB1P19838 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.78■□□□□ 0.92
NFKB1P19838 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.78■□□□□ 0.92
NFKB1P19838 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.78■□□□□ 0.92
NFKB1P19838 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKB1P19838 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB1P19838 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.78■□□□□ 0.92
NFKB1P19838 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms