Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.29■■□□□ 1.96
CSB-PGBD3P0DP91 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CSB-PGBD3P0DP91 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 PENK-204ENST00000518770 863 ntTSL 2 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 AL355075.4-201ENST00000554988 638 ntBASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 AL356652.1-201ENST00000615962 565 ntBASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CSB-PGBD3P0DP91 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 RARRES2P10-201ENST00000564312 460 ntBASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CSB-PGBD3P0DP91 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.26■■□□□ 1.95
CSB-PGBD3P0DP91 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC27.25■■□□□ 1.95
CSB-PGBD3P0DP91 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 SNX21-213ENST00000614929 587 ntTSL 5 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CSB-PGBD3P0DP91 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 ME2-206ENST00000638410 2289 ntTSL 5 BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 ME2-210ENST00000639255 2262 ntTSL 5 BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CSB-PGBD3P0DP91 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CSB-PGBD3P0DP91 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms