Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CALM3P0DP25 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CALM3P0DP25 SLC29A4P1-201ENST00000398760 971 ntBASIC23.81■■□□□ 1.4
CALM3P0DP25 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CALM3P0DP25 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CALM3P0DP25 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.81■■□□□ 1.4
CALM3P0DP25 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.81■■□□□ 1.4
CALM3P0DP25 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CALM3P0DP25 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.81■■□□□ 1.4
CALM3P0DP25 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.81■■□□□ 1.4
CALM3P0DP25 KRT8P36-201ENST00000489121 1440 ntBASIC23.81■■□□□ 1.4
CALM3P0DP25 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CALM3P0DP25 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.8■■□□□ 1.4
CALM3P0DP25 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.8■■□□□ 1.4
CALM3P0DP25 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CALM3P0DP25 AL355472.2-201ENST00000422958 438 ntBASIC23.8■■□□□ 1.4
CALM3P0DP25 GUSBP6-202ENST00000438529 1198 ntBASIC23.8■■□□□ 1.4
CALM3P0DP25 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CALM3P0DP25 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.8■■□□□ 1.4
CALM3P0DP25 AL589743.5-201ENST00000616611 1050 ntBASIC23.8■■□□□ 1.4
CALM3P0DP25 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.8■■□□□ 1.4
CALM3P0DP25 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.8■■□□□ 1.4
CALM3P0DP25 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CALM3P0DP25 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALM3P0DP25 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CALM3P0DP25 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.79■■□□□ 1.4
CALM3P0DP25 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CALM3P0DP25 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.79■■□□□ 1.4
CALM3P0DP25 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.79■■□□□ 1.4
CALM3P0DP25 AL109923.1-201ENST00000618799 583 ntBASIC23.79■■□□□ 1.4
CALM3P0DP25 AC105020.6-201ENST00000621523 1217 ntBASIC23.79■■□□□ 1.4
CALM3P0DP25 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.79■■□□□ 1.4
CALM3P0DP25 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CALM3P0DP25 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CALM3P0DP25 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.79■■□□□ 1.4
CALM3P0DP25 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CALM3P0DP25 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.78■■□□□ 1.4
CALM3P0DP25 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CALM3P0DP25 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.78■■□□□ 1.4
CALM3P0DP25 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CALM3P0DP25 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CALM3P0DP25 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.78■■□□□ 1.4
CALM3P0DP25 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.78■■□□□ 1.4
CALM3P0DP25 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.78■■□□□ 1.4
CALM3P0DP25 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALM3P0DP25 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.77■■□□□ 1.4
CALM3P0DP25 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALM3P0DP25 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.77■■□□□ 1.4
CALM3P0DP25 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.77■■□□□ 1.4
CALM3P0DP25 MIPEPP3-201ENST00000412105 444 ntBASIC23.77■■□□□ 1.4
CALM3P0DP25 BX276092.2-201ENST00000417668 665 ntBASIC23.77■■□□□ 1.4
CALM3P0DP25 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.77■■□□□ 1.4
CALM3P0DP25 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CALM3P0DP25 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALM3P0DP25 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALM3P0DP25 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
CALM3P0DP25 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CALM3P0DP25 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.76■■□□□ 1.39
CALM3P0DP25 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CALM3P0DP25 LSM12P1-201ENST00000411836 588 ntBASIC23.76■■□□□ 1.39
CALM3P0DP25 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.76■■□□□ 1.39
CALM3P0DP25 AC104771.1-201ENST00000603335 964 ntBASIC23.76■■□□□ 1.39
CALM3P0DP25 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CALM3P0DP25 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CALM3P0DP25 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.76■■□□□ 1.39
CALM3P0DP25 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.75■■□□□ 1.39
CALM3P0DP25 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 AL121603.2-201ENST00000557373 2117 ntBASIC23.75■■□□□ 1.39
CALM3P0DP25 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CALM3P0DP25 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CALM3P0DP25 ID1-201ENST00000376105 1233 ntBASIC23.75■■□□□ 1.39
CALM3P0DP25 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.75■■□□□ 1.39
CALM3P0DP25 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.75■■□□□ 1.39
CALM3P0DP25 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALM3P0DP25 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms