Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CD48P09326 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CD48P09326 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.24■□□□□ 0.99
CD48P09326 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.23■□□□□ 0.99
CD48P09326 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.23■□□□□ 0.99
CD48P09326 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.23■□□□□ 0.99
CD48P09326 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.23■□□□□ 0.99
CD48P09326 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CD48P09326 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CD48P09326 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.23■□□□□ 0.99
CD48P09326 MIR5787-201ENST00000611784 55 ntBASIC21.23■□□□□ 0.99
CD48P09326 AC011767.1-201ENST00000617410 1153 ntBASIC21.23■□□□□ 0.99
CD48P09326 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.23■□□□□ 0.99
CD48P09326 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD48P09326 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CD48P09326 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CD48P09326 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 PCDHAC2-203ENST00000615316 3011 ntBASIC21.22■□□□□ 0.99
CD48P09326 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CD48P09326 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.22■□□□□ 0.99
CD48P09326 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.22■□□□□ 0.99
CD48P09326 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.22■□□□□ 0.99
CD48P09326 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.22■□□□□ 0.99
CD48P09326 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CD48P09326 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CD48P09326 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.22■□□□□ 0.99
CD48P09326 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD48P09326 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CD48P09326 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD48P09326 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.21■□□□□ 0.99
CD48P09326 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD48P09326 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CD48P09326 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD48P09326 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD48P09326 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.21■□□□□ 0.99
CD48P09326 AC006015.1-201ENST00000429970 570 ntBASIC21.21■□□□□ 0.99
CD48P09326 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.21■□□□□ 0.99
CD48P09326 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.21■□□□□ 0.99
CD48P09326 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.21■□□□□ 0.99
CD48P09326 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CD48P09326 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD48P09326 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD48P09326 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD48P09326 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CD48P09326 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD48P09326 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 AC016769.1-201ENST00000409132 1010 ntBASIC21.2■□□□□ 0.98
CD48P09326 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CD48P09326 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.2■□□□□ 0.98
CD48P09326 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CD48P09326 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CD48P09326 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
CD48P09326 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD48P09326 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CD48P09326 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.19■□□□□ 0.98
CD48P09326 AC112907.3-201ENST00000577781 2400 ntBASIC21.19■□□□□ 0.98
CD48P09326 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.19■□□□□ 0.98
CD48P09326 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 AL162377.1-201ENST00000618844 1793 ntBASIC21.19■□□□□ 0.98
CD48P09326 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CD48P09326 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD48P09326 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CD48P09326 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CD48P09326 KRT18P11-201ENST00000435214 1283 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms