Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.85■□□□□ 0.93
COL4A2P08572 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.85■□□□□ 0.93
COL4A2P08572 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.85■□□□□ 0.93
COL4A2P08572 AC006557.6-201ENST00000623071 864 ntBASIC20.85■□□□□ 0.93
COL4A2P08572 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.85■□□□□ 0.93
COL4A2P08572 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A2P08572 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL4A2P08572 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A2P08572 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A2P08572 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A2P08572 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.84■□□□□ 0.93
COL4A2P08572 AC097493.4-201ENST00000641197 219 ntBASIC20.84■□□□□ 0.93
COL4A2P08572 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A2P08572 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.84■□□□□ 0.93
COL4A2P08572 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A2P08572 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A2P08572 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.84■□□□□ 0.93
COL4A2P08572 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
COL4A2P08572 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.84■□□□□ 0.93
COL4A2P08572 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
COL4A2P08572 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.84■□□□□ 0.93
COL4A2P08572 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.83■□□□□ 0.93
COL4A2P08572 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A2P08572 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A2P08572 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COL4A2P08572 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A2P08572 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A2P08572 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.83■□□□□ 0.92
COL4A2P08572 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
COL4A2P08572 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
COL4A2P08572 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.83■□□□□ 0.92
COL4A2P08572 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.83■□□□□ 0.92
COL4A2P08572 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL4A2P08572 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL4A2P08572 KRT17P2-201ENST00000300992 1314 ntBASIC20.83■□□□□ 0.92
COL4A2P08572 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.82■□□□□ 0.92
COL4A2P08572 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.82■□□□□ 0.92
COL4A2P08572 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 RN7SL850P-201ENST00000579959 291 ntBASIC20.82■□□□□ 0.92
COL4A2P08572 AC133561.5-201ENST00000635547 218 ntBASIC20.82■□□□□ 0.92
COL4A2P08572 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.82■□□□□ 0.92
COL4A2P08572 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.82■□□□□ 0.92
COL4A2P08572 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.82■□□□□ 0.92
COL4A2P08572 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.82■□□□□ 0.92
COL4A2P08572 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
COL4A2P08572 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.82■□□□□ 0.92
COL4A2P08572 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A2P08572 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
COL4A2P08572 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
COL4A2P08572 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.81■□□□□ 0.92
COL4A2P08572 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.81■□□□□ 0.92
COL4A2P08572 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.81■□□□□ 0.92
COL4A2P08572 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.81■□□□□ 0.92
COL4A2P08572 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.81■□□□□ 0.92
COL4A2P08572 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.81■□□□□ 0.92
COL4A2P08572 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.81■□□□□ 0.92
COL4A2P08572 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
COL4A2P08572 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.81■□□□□ 0.92
COL4A2P08572 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A2P08572 PRKY-204ENST00000533551 1019 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms