Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCCBP05166 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.32■□□□□ 0.84
PCCBP05166 FAM201B-201ENST00000458407 597 ntBASIC20.32■□□□□ 0.84
PCCBP05166 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.32■□□□□ 0.84
PCCBP05166 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCCBP05166 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.32■□□□□ 0.84
PCCBP05166 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCCBP05166 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.32■□□□□ 0.84
PCCBP05166 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCCBP05166 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.31■□□□□ 0.84
PCCBP05166 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.31■□□□□ 0.84
PCCBP05166 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.31■□□□□ 0.84
PCCBP05166 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCCBP05166 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.31■□□□□ 0.84
PCCBP05166 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.31■□□□□ 0.84
PCCBP05166 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.31■□□□□ 0.84
PCCBP05166 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCCBP05166 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCCBP05166 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.3■□□□□ 0.84
PCCBP05166 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.3■□□□□ 0.84
PCCBP05166 PGM5P4-201ENST00000421970 445 ntBASIC20.3■□□□□ 0.84
PCCBP05166 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCCBP05166 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.3■□□□□ 0.84
PCCBP05166 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCCBP05166 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.29■□□□□ 0.84
PCCBP05166 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCCBP05166 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCCBP05166 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.29■□□□□ 0.84
PCCBP05166 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.29■□□□□ 0.84
PCCBP05166 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCCBP05166 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCCBP05166 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.29■□□□□ 0.84
PCCBP05166 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.29■□□□□ 0.84
PCCBP05166 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.29■□□□□ 0.84
PCCBP05166 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.29■□□□□ 0.84
PCCBP05166 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.29■□□□□ 0.84
PCCBP05166 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.29■□□□□ 0.84
PCCBP05166 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.29■□□□□ 0.84
PCCBP05166 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCCBP05166 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCCBP05166 AC121338.2-201ENST00000622535 1744 ntBASIC20.29■□□□□ 0.84
PCCBP05166 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCCBP05166 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.29■□□□□ 0.84
PCCBP05166 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCCBP05166 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCCBP05166 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.28■□□□□ 0.84
PCCBP05166 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCCBP05166 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCCBP05166 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCCBP05166 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.28■□□□□ 0.84
PCCBP05166 POU5F1P3-201ENST00000428824 1078 ntBASIC20.28■□□□□ 0.84
PCCBP05166 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.28■□□□□ 0.84
PCCBP05166 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCCBP05166 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCCBP05166 AL356652.1-201ENST00000615962 565 ntBASIC20.28■□□□□ 0.84
PCCBP05166 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCCBP05166 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCCBP05166 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.28■□□□□ 0.84
PCCBP05166 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.28■□□□□ 0.84
PCCBP05166 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCCBP05166 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCCBP05166 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCCBP05166 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCCBP05166 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PCCBP05166 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.27■□□□□ 0.84
PCCBP05166 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCCBP05166 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms