Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
PDGFAP04085 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFAP04085 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFAP04085 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PDGFAP04085 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFAP04085 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PDGFAP04085 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFAP04085 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFAP04085 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFAP04085 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFAP04085 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.1■□□□□ 0.65
PDGFAP04085 FAM197Y4-202ENST00000622692 608 ntBASIC19.1■□□□□ 0.65
PDGFAP04085 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
PDGFAP04085 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
PDGFAP04085 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFAP04085 GUSBP5-202ENST00000510805 1989 ntBASIC19.1■□□□□ 0.65
PDGFAP04085 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PDGFAP04085 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDGFAP04085 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
PDGFAP04085 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFAP04085 CDV3P1-201ENST00000471403 739 ntBASIC19.09■□□□□ 0.65
PDGFAP04085 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFAP04085 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFAP04085 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFAP04085 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFAP04085 ECEL1P1-201ENST00000373592 1742 ntBASIC19.08■□□□□ 0.65
PDGFAP04085 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFAP04085 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFAP04085 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFAP04085 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFAP04085 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFAP04085 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFAP04085 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFAP04085 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFAP04085 AC092368.3-202ENST00000574180 1591 ntBASIC19.08■□□□□ 0.65
PDGFAP04085 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFAP04085 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.08■□□□□ 0.64
PDGFAP04085 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFAP04085 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.08■□□□□ 0.64
PDGFAP04085 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.08■□□□□ 0.64
PDGFAP04085 MIR4497-201ENST00000583208 89 ntBASIC19.08■□□□□ 0.64
PDGFAP04085 Z99916.2-201ENST00000604037 246 ntBASIC19.08■□□□□ 0.64
PDGFAP04085 AL589743.5-201ENST00000616611 1050 ntBASIC19.08■□□□□ 0.64
PDGFAP04085 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.08■□□□□ 0.64
PDGFAP04085 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.08■□□□□ 0.64
PDGFAP04085 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.08■□□□□ 0.64
PDGFAP04085 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFAP04085 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.08■□□□□ 0.64
PDGFAP04085 AC026471.6-201ENST00000622954 1905 ntBASIC19.08■□□□□ 0.64
PDGFAP04085 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFAP04085 AF106564.1-201ENST00000607058 2553 ntBASIC19.07■□□□□ 0.64
PDGFAP04085 C11orf96-202ENST00000528572 1834 ntBASIC19.07■□□□□ 0.64
PDGFAP04085 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFAP04085 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDGFAP04085 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFAP04085 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFAP04085 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFAP04085 MCRIP2P1-201ENST00000394346 511 ntBASIC19.07■□□□□ 0.64
PDGFAP04085 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.07■□□□□ 0.64
PDGFAP04085 AC245052.3-201ENST00000450182 901 ntBASIC19.07■□□□□ 0.64
PDGFAP04085 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.07■□□□□ 0.64
PDGFAP04085 RN7SL471P-201ENST00000580476 299 ntBASIC19.07■□□□□ 0.64
PDGFAP04085 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFAP04085 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFAP04085 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFAP04085 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFAP04085 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFAP04085 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFAP04085 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PDGFAP04085 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
PDGFAP04085 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDGFAP04085 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 MIR718-201ENST00000390190 70 ntBASIC19.06■□□□□ 0.64
PDGFAP04085 ECEL1P3-201ENST00000427961 737 ntBASIC19.06■□□□□ 0.64
PDGFAP04085 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.06■□□□□ 0.64
PDGFAP04085 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.06■□□□□ 0.64
PDGFAP04085 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFAP04085 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.06■□□□□ 0.64
PDGFAP04085 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFAP04085 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.06■□□□□ 0.64
PDGFAP04085 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDGFAP04085 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
PDGFAP04085 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms