Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.56
COL1A1P02452 FAM197Y4-202ENST00000622692 608 ntBASIC24.83■■□□□ 1.56
COL1A1P02452 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
COL1A1P02452 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL1A1P02452 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL1A1P02452 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL1A1P02452 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.82■■□□□ 1.56
COL1A1P02452 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL1A1P02452 RPPH1-201ENST00000516869 333 ntBASIC24.82■■□□□ 1.56
COL1A1P02452 MIR4497-201ENST00000583208 89 ntBASIC24.82■■□□□ 1.56
COL1A1P02452 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.82■■□□□ 1.56
COL1A1P02452 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A1P02452 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.81■■□□□ 1.56
COL1A1P02452 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A1P02452 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A1P02452 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
COL1A1P02452 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A1P02452 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
COL1A1P02452 C2orf69P4-201ENST00000565394 541 ntBASIC24.81■■□□□ 1.56
COL1A1P02452 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.81■■□□□ 1.56
COL1A1P02452 AC069544.1-201ENST00000609399 999 ntBASIC24.81■■□□□ 1.56
COL1A1P02452 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC24.81■■□□□ 1.56
COL1A1P02452 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A1P02452 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A1P02452 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL1A1P02452 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL1A1P02452 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL1A1P02452 C1QBPP2-201ENST00000528754 825 ntBASIC24.8■■□□□ 1.56
COL1A1P02452 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.8■■□□□ 1.56
COL1A1P02452 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.8■■□□□ 1.56
COL1A1P02452 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.8■■□□□ 1.56
COL1A1P02452 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL1A1P02452 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL1A1P02452 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL1A1P02452 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
COL1A1P02452 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.8■■□□□ 1.56
COL1A1P02452 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL1A1P02452 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL1A1P02452 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL1A1P02452 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL1A1P02452 KRT17P3-201ENST00000420566 1262 ntBASIC24.79■■□□□ 1.56
COL1A1P02452 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.79■■□□□ 1.56
COL1A1P02452 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.79■■□□□ 1.56
COL1A1P02452 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.79■■□□□ 1.56
COL1A1P02452 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL1A1P02452 AC011484.1-201ENST00000377652 1995 ntBASIC24.79■■□□□ 1.56
COL1A1P02452 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.79■■□□□ 1.56
COL1A1P02452 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL1A1P02452 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL1A1P02452 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL1A1P02452 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL1A1P02452 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL1A1P02452 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL1A1P02452 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL1A1P02452 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
COL1A1P02452 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.78■■□□□ 1.56
COL1A1P02452 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC24.78■■□□□ 1.56
COL1A1P02452 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
COL1A1P02452 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.78■■□□□ 1.56
COL1A1P02452 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.78■■□□□ 1.56
COL1A1P02452 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.78■■□□□ 1.56
COL1A1P02452 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
COL1A1P02452 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL1A1P02452 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
COL1A1P02452 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL1A1P02452 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.78■■□□□ 1.56
COL1A1P02452 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL1A1P02452 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
COL1A1P02452 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
COL1A1P02452 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL1A1P02452 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
COL1A1P02452 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.77■■□□□ 1.56
COL1A1P02452 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.77■■□□□ 1.56
COL1A1P02452 AC073912.3-201ENST00000624414 853 ntBASIC24.77■■□□□ 1.56
COL1A1P02452 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
COL1A1P02452 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
COL1A1P02452 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
COL1A1P02452 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL1A1P02452 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
COL1A1P02452 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.77■■□□□ 1.56
COL1A1P02452 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.77■■□□□ 1.56
COL1A1P02452 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL1A1P02452 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL1A1P02452 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL1A1P02452 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL1A1P02452 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC24.76■■□□□ 1.55
COL1A1P02452 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.76■■□□□ 1.55
COL1A1P02452 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
COL1A1P02452 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC24.76■■□□□ 1.55
COL1A1P02452 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.76■■□□□ 1.55
COL1A1P02452 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms