Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFNA1P01562 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
IFNA1P01562 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
IFNA1P01562 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.21■□□□□ 0.19
IFNA1P01562 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
IFNA1P01562 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFNA1P01562 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.21■□□□□ 0.19
IFNA1P01562 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFNA1P01562 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
IFNA1P01562 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.21■□□□□ 0.19
IFNA1P01562 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFNA1P01562 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.21■□□□□ 0.19
IFNA1P01562 MIR6722-201ENST00000617286 78 ntBASIC16.21■□□□□ 0.19
IFNA1P01562 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.21■□□□□ 0.19
IFNA1P01562 AC087239.1-201ENST00000622671 572 ntBASIC16.21■□□□□ 0.19
IFNA1P01562 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.21■□□□□ 0.19
IFNA1P01562 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFNA1P01562 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.21■□□□□ 0.19
IFNA1P01562 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.21■□□□□ 0.18
IFNA1P01562 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
IFNA1P01562 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
IFNA1P01562 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
IFNA1P01562 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
IFNA1P01562 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
IFNA1P01562 AP004607.7-201ENST00000527152 1677 ntBASIC16.21■□□□□ 0.18
IFNA1P01562 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
IFNA1P01562 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
IFNA1P01562 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.2■□□□□ 0.18
IFNA1P01562 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.2■□□□□ 0.18
IFNA1P01562 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.2■□□□□ 0.18
IFNA1P01562 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.2■□□□□ 0.18
IFNA1P01562 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.2■□□□□ 0.18
IFNA1P01562 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 AC068587.7-201ENST00000641602 218 ntBASIC16.2■□□□□ 0.18
IFNA1P01562 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
IFNA1P01562 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
IFNA1P01562 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFNA1P01562 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
IFNA1P01562 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
IFNA1P01562 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
IFNA1P01562 FP700111.2-201ENST00000619190 1892 ntBASIC16.19■□□□□ 0.18
IFNA1P01562 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.19■□□□□ 0.18
IFNA1P01562 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.19■□□□□ 0.18
IFNA1P01562 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 AC129492.7-201ENST00000622992 756 ntBASIC16.19■□□□□ 0.18
IFNA1P01562 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 AC004408.2-201ENST00000623613 2777 ntBASIC16.19■□□□□ 0.18
IFNA1P01562 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFNA1P01562 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
IFNA1P01562 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.19■□□□□ 0.18
IFNA1P01562 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
IFNA1P01562 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
IFNA1P01562 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 TCF3P1-201ENST00000423021 1937 ntBASIC16.18■□□□□ 0.18
IFNA1P01562 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.18■□□□□ 0.18
IFNA1P01562 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
IFNA1P01562 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.18■□□□□ 0.18
IFNA1P01562 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 RNF126P1-201ENST00000567452 1320 ntBASIC16.18■□□□□ 0.18
IFNA1P01562 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNA1P01562 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
IFNA1P01562 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms