Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PDGFBP01127 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.77■□□□□ 0.92
PDGFBP01127 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PDGFBP01127 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.77■□□□□ 0.92
PDGFBP01127 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.77■□□□□ 0.92
PDGFBP01127 TPM4P1-201ENST00000436100 807 ntBASIC20.77■□□□□ 0.92
PDGFBP01127 KRT16P5-201ENST00000455284 522 ntBASIC20.77■□□□□ 0.92
PDGFBP01127 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.77■□□□□ 0.92
PDGFBP01127 NAPSB-206ENST00000562112 1266 ntBASIC20.77■□□□□ 0.92
PDGFBP01127 AC073195.1-201ENST00000607241 877 ntBASIC20.77■□□□□ 0.92
PDGFBP01127 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.77■□□□□ 0.92
PDGFBP01127 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.77■□□□□ 0.92
PDGFBP01127 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFBP01127 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.77■□□□□ 0.91
PDGFBP01127 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.77■□□□□ 0.91
PDGFBP01127 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDGFBP01127 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PDGFBP01127 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.76■□□□□ 0.91
PDGFBP01127 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.76■□□□□ 0.91
PDGFBP01127 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFBP01127 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.76■□□□□ 0.91
PDGFBP01127 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFBP01127 AC116050.2-201ENST00000612102 1779 ntBASIC20.76■□□□□ 0.91
PDGFBP01127 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 AC068473.5-201ENST00000616428 2072 ntBASIC20.76■□□□□ 0.91
PDGFBP01127 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDGFBP01127 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFBP01127 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFBP01127 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFBP01127 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.75■□□□□ 0.91
PDGFBP01127 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFBP01127 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFBP01127 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFBP01127 AL353807.1-201ENST00000427475 662 ntBASIC20.75■□□□□ 0.91
PDGFBP01127 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.75■□□□□ 0.91
PDGFBP01127 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.75■□□□□ 0.91
PDGFBP01127 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.75■□□□□ 0.91
PDGFBP01127 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.75■□□□□ 0.91
PDGFBP01127 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFBP01127 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PDGFBP01127 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFBP01127 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.74■□□□□ 0.91
PDGFBP01127 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.74■□□□□ 0.91
PDGFBP01127 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.74■□□□□ 0.91
PDGFBP01127 UPK3BP1-201ENST00000428678 509 ntBASIC20.74■□□□□ 0.91
PDGFBP01127 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.74■□□□□ 0.91
PDGFBP01127 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.74■□□□□ 0.91
PDGFBP01127 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFBP01127 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDGFBP01127 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFBP01127 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.73■□□□□ 0.91
PDGFBP01127 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFBP01127 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.73■□□□□ 0.91
PDGFBP01127 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.73■□□□□ 0.91
PDGFBP01127 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFBP01127 AC010542.4-201ENST00000563151 1910 ntBASIC20.73■□□□□ 0.91
PDGFBP01127 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.73■□□□□ 0.91
PDGFBP01127 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.73■□□□□ 0.91
PDGFBP01127 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.73■□□□□ 0.91
PDGFBP01127 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.73■□□□□ 0.91
PDGFBP01127 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PDGFBP01127 AC010203.1-204ENST00000548782 407 ntBASIC20.73■□□□□ 0.91
PDGFBP01127 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.73■□□□□ 0.91
PDGFBP01127 AC093323.1-202ENST00000635031 2045 ntBASIC20.73■□□□□ 0.91
PDGFBP01127 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.73■□□□□ 0.91
PDGFBP01127 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFBP01127 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.72■□□□□ 0.91
PDGFBP01127 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFBP01127 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms