Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.12■□□□□ 0.33
SIX6O95475 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SIX6O95475 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.12■□□□□ 0.33
SIX6O95475 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SIX6O95475 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX6O95475 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.12■□□□□ 0.33
SIX6O95475 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SIX6O95475 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 AC005332.7-201ENST00000614046 2005 ntBASIC17.11■□□□□ 0.33
SIX6O95475 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.11■□□□□ 0.33
SIX6O95475 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 AC007613.1-201ENST00000572811 2597 ntBASIC17.11■□□□□ 0.33
SIX6O95475 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.11■□□□□ 0.33
SIX6O95475 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.11■□□□□ 0.33
SIX6O95475 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.11■□□□□ 0.33
SIX6O95475 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.11■□□□□ 0.33
SIX6O95475 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX6O95475 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.1■□□□□ 0.33
SIX6O95475 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.1■□□□□ 0.33
SIX6O95475 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.1■□□□□ 0.33
SIX6O95475 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.1■□□□□ 0.33
SIX6O95475 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SIX6O95475 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.1■□□□□ 0.33
SIX6O95475 AL451085.2-201ENST00000605085 799 ntBASIC17.1■□□□□ 0.33
SIX6O95475 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 FZD10-202ENST00000539839 3282 ntBASIC17.1■□□□□ 0.33
SIX6O95475 AC093503.3-201ENST00000624917 2352 ntBASIC17.1■□□□□ 0.33
SIX6O95475 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
SIX6O95475 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIX6O95475 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX6O95475 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
SIX6O95475 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.09■□□□□ 0.33
SIX6O95475 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX6O95475 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SIX6O95475 AL034346.1-201ENST00000568244 1277 ntBASIC17.09■□□□□ 0.33
SIX6O95475 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX6O95475 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SIX6O95475 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX6O95475 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SIX6O95475 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX6O95475 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX6O95475 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SIX6O95475 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SIX6O95475 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SIX6O95475 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.08■□□□□ 0.32
SIX6O95475 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.08■□□□□ 0.32
SIX6O95475 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SIX6O95475 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.08■□□□□ 0.32
SIX6O95475 MIR4449-201ENST00000578365 66 ntBASIC17.08■□□□□ 0.32
SIX6O95475 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms