Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LCA5LO95447 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LCA5LO95447 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCA5LO95447 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LCA5LO95447 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCA5LO95447 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.78■■□□□ 1.08
LCA5LO95447 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCA5LO95447 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LCA5LO95447 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCA5LO95447 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCA5LO95447 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCA5LO95447 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCA5LO95447 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCA5LO95447 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LCA5LO95447 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LCA5LO95447 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.77■■□□□ 1.08
LCA5LO95447 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.77■■□□□ 1.08
LCA5LO95447 AC120498.10-201ENST00000621827 505 ntBASIC21.77■■□□□ 1.08
LCA5LO95447 MIR6084-201ENST00000622012 110 ntBASIC21.77■■□□□ 1.08
LCA5LO95447 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.77■■□□□ 1.08
LCA5LO95447 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCA5LO95447 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.77■■□□□ 1.08
LCA5LO95447 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCA5LO95447 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.77■■□□□ 1.07
LCA5LO95447 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LCA5LO95447 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LCA5LO95447 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
LCA5LO95447 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.76■■□□□ 1.07
LCA5LO95447 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LCA5LO95447 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCA5LO95447 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCA5LO95447 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LCA5LO95447 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LCA5LO95447 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.76■■□□□ 1.07
LCA5LO95447 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.76■■□□□ 1.07
LCA5LO95447 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.76■■□□□ 1.07
LCA5LO95447 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.76■■□□□ 1.07
LCA5LO95447 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.76■■□□□ 1.07
LCA5LO95447 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCA5LO95447 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCA5LO95447 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCA5LO95447 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.76■■□□□ 1.07
LCA5LO95447 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCA5LO95447 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.75■■□□□ 1.07
LCA5LO95447 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.75■■□□□ 1.07
LCA5LO95447 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.75■■□□□ 1.07
LCA5LO95447 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCA5LO95447 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LCA5LO95447 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.75■■□□□ 1.07
LCA5LO95447 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.75■■□□□ 1.07
LCA5LO95447 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LCA5LO95447 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCA5LO95447 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
LCA5LO95447 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCA5LO95447 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
LCA5LO95447 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCA5LO95447 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCA5LO95447 KRT8P36-201ENST00000489121 1440 ntBASIC21.74■■□□□ 1.07
LCA5LO95447 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCA5LO95447 SLC7A5P2-201ENST00000553010 536 ntBASIC21.74■■□□□ 1.07
LCA5LO95447 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.74■■□□□ 1.07
LCA5LO95447 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCA5LO95447 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCA5LO95447 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCA5LO95447 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCA5LO95447 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
LCA5LO95447 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.74■■□□□ 1.07
LCA5LO95447 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LCA5LO95447 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LCA5LO95447 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
LCA5LO95447 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.73■■□□□ 1.07
LCA5LO95447 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 AC027612.3-201ENST00000413684 1047 ntBASIC21.73■■□□□ 1.07
LCA5LO95447 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.73■■□□□ 1.07
LCA5LO95447 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
LCA5LO95447 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCA5LO95447 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.73■■□□□ 1.07
LCA5LO95447 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.73■■□□□ 1.07
LCA5LO95447 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LCA5LO95447 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.72■■□□□ 1.07
LCA5LO95447 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.72■■□□□ 1.07
LCA5LO95447 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCA5LO95447 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.72■■□□□ 1.07
LCA5LO95447 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCA5LO95447 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCA5LO95447 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCA5LO95447 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LCA5LO95447 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCA5LO95447 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.72■■□□□ 1.07
LCA5LO95447 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms