Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CEACAM4O75871 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CEACAM4O75871 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.73■□□□□ 0.59
CEACAM4O75871 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.73■□□□□ 0.59
CEACAM4O75871 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM4O75871 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CEACAM4O75871 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.72■□□□□ 0.59
CEACAM4O75871 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM4O75871 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.72■□□□□ 0.59
CEACAM4O75871 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.72■□□□□ 0.59
CEACAM4O75871 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.72■□□□□ 0.59
CEACAM4O75871 AC113410.3-201ENST00000623366 203 ntBASIC18.72■□□□□ 0.59
CEACAM4O75871 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM4O75871 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM4O75871 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CEACAM4O75871 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CEACAM4O75871 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CEACAM4O75871 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CEACAM4O75871 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.71■□□□□ 0.59
CEACAM4O75871 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.71■□□□□ 0.59
CEACAM4O75871 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.71■□□□□ 0.59
CEACAM4O75871 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.71■□□□□ 0.59
CEACAM4O75871 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.71■□□□□ 0.59
CEACAM4O75871 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CEACAM4O75871 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM4O75871 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CEACAM4O75871 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.71■□□□□ 0.59
CEACAM4O75871 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CEACAM4O75871 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.7■□□□□ 0.58
CEACAM4O75871 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
CEACAM4O75871 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.7■□□□□ 0.58
CEACAM4O75871 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.7■□□□□ 0.58
CEACAM4O75871 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.7■□□□□ 0.58
CEACAM4O75871 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CEACAM4O75871 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.7■□□□□ 0.58
CEACAM4O75871 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.7■□□□□ 0.58
CEACAM4O75871 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CEACAM4O75871 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CEACAM4O75871 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM4O75871 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.69■□□□□ 0.58
CEACAM4O75871 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
CEACAM4O75871 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.69■□□□□ 0.58
CEACAM4O75871 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
CEACAM4O75871 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.69■□□□□ 0.58
CEACAM4O75871 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.69■□□□□ 0.58
CEACAM4O75871 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.69■□□□□ 0.58
CEACAM4O75871 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CEACAM4O75871 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.69■□□□□ 0.58
CEACAM4O75871 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.69■□□□□ 0.58
CEACAM4O75871 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CEACAM4O75871 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CEACAM4O75871 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.69■□□□□ 0.58
CEACAM4O75871 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
CEACAM4O75871 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CEACAM4O75871 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM4O75871 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
CEACAM4O75871 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.68■□□□□ 0.58
CEACAM4O75871 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM4O75871 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms