Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLN5O75503 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.61■□□□□ 0.25
CLN5O75503 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLN5O75503 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
CLN5O75503 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.6■□□□□ 0.25
CLN5O75503 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLN5O75503 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.6■□□□□ 0.25
CLN5O75503 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.6■□□□□ 0.25
CLN5O75503 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
CLN5O75503 BX842568.3-201ENST00000418104 571 ntBASIC16.6■□□□□ 0.25
CLN5O75503 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.6■□□□□ 0.25
CLN5O75503 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.6■□□□□ 0.25
CLN5O75503 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.6■□□□□ 0.25
CLN5O75503 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.6■□□□□ 0.25
CLN5O75503 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.6■□□□□ 0.25
CLN5O75503 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLN5O75503 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLN5O75503 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.6■□□□□ 0.25
CLN5O75503 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLN5O75503 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLN5O75503 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLN5O75503 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.59■□□□□ 0.25
CLN5O75503 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.59■□□□□ 0.25
CLN5O75503 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.59■□□□□ 0.25
CLN5O75503 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.59■□□□□ 0.25
CLN5O75503 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.59■□□□□ 0.25
CLN5O75503 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.59■□□□□ 0.25
CLN5O75503 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.59■□□□□ 0.25
CLN5O75503 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLN5O75503 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.59■□□□□ 0.25
CLN5O75503 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLN5O75503 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.59■□□□□ 0.25
CLN5O75503 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLN5O75503 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.59■□□□□ 0.25
CLN5O75503 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.59■□□□□ 0.25
CLN5O75503 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.58■□□□□ 0.25
CLN5O75503 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLN5O75503 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLN5O75503 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CLN5O75503 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CLN5O75503 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.58■□□□□ 0.25
CLN5O75503 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
CLN5O75503 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLN5O75503 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLN5O75503 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLN5O75503 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CLN5O75503 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLN5O75503 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
CLN5O75503 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
CLN5O75503 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 UNC93B3-201ENST00000308076 687 ntBASIC16.58■□□□□ 0.24
CLN5O75503 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLN5O75503 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLN5O75503 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.58■□□□□ 0.24
CLN5O75503 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLN5O75503 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLN5O75503 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.58■□□□□ 0.24
CLN5O75503 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLN5O75503 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.58■□□□□ 0.24
CLN5O75503 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLN5O75503 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.58■□□□□ 0.24
CLN5O75503 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLN5O75503 LTB4R2-202ENST00000528054 3092 ntBASIC16.57■□□□□ 0.24
CLN5O75503 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLN5O75503 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLN5O75503 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms