Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.34■■□□□ 1.01
LRCH4O75427 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.34■■□□□ 1.01
LRCH4O75427 AL591742.1-201ENST00000604433 565 ntBASIC21.34■■□□□ 1.01
LRCH4O75427 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH4O75427 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.34■■□□□ 1.01
LRCH4O75427 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.34■■□□□ 1.01
LRCH4O75427 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH4O75427 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH4O75427 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LRCH4O75427 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH4O75427 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
LRCH4O75427 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.33■■□□□ 1.01
LRCH4O75427 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 AL512408.1-201ENST00000569378 2000 ntBASIC21.33■■□□□ 1.01
LRCH4O75427 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.33■■□□□ 1.01
LRCH4O75427 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.33■■□□□ 1.01
LRCH4O75427 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
LRCH4O75427 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.33■■□□□ 1.01
LRCH4O75427 DUX4L16-201ENST00000555130 1264 ntBASIC21.33■■□□□ 1.01
LRCH4O75427 AC092666.2-201ENST00000613287 246 ntBASIC21.33■■□□□ 1.01
LRCH4O75427 AC011767.1-201ENST00000617410 1153 ntBASIC21.33■■□□□ 1.01
LRCH4O75427 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.33■■□□□ 1.01
LRCH4O75427 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH4O75427 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
LRCH4O75427 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
LRCH4O75427 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.33■■□□□ 1
LRCH4O75427 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.33■■□□□ 1
LRCH4O75427 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
LRCH4O75427 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.33■■□□□ 1
LRCH4O75427 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LRCH4O75427 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.32■■□□□ 1
LRCH4O75427 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LRCH4O75427 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
LRCH4O75427 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 CNN2P6-201ENST00000439038 900 ntBASIC21.32■■□□□ 1
LRCH4O75427 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.32■■□□□ 1
LRCH4O75427 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 AC016405.3-201ENST00000607710 860 ntBASIC21.32■■□□□ 1
LRCH4O75427 FAM21FP-204ENST00000608637 956 ntBASIC21.32■■□□□ 1
LRCH4O75427 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.32■■□□□ 1
LRCH4O75427 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.32■■□□□ 1
LRCH4O75427 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.32■■□□□ 1
LRCH4O75427 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRCH4O75427 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRCH4O75427 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH4O75427 AC092720.2-201ENST00000602388 1665 ntBASIC21.31■■□□□ 1
LRCH4O75427 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.31■■□□□ 1
LRCH4O75427 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LRCH4O75427 AL162377.1-201ENST00000618844 1793 ntBASIC21.31■■□□□ 1
LRCH4O75427 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH4O75427 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH4O75427 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH4O75427 AL162412.1-201ENST00000567129 965 ntBASIC21.31■■□□□ 1
LRCH4O75427 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.31■■□□□ 1
LRCH4O75427 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.31■■□□□ 1
LRCH4O75427 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH4O75427 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.3■■□□□ 1
LRCH4O75427 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.3■■□□□ 1
LRCH4O75427 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.3■■□□□ 1
LRCH4O75427 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.3■■□□□ 1
LRCH4O75427 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.3■■□□□ 1
LRCH4O75427 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.3■■□□□ 1
LRCH4O75427 AC022517.1-201ENST00000592429 346 ntBASIC21.3■■□□□ 1
LRCH4O75427 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
LRCH4O75427 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.3■■□□□ 1
LRCH4O75427 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.3■■□□□ 1
LRCH4O75427 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH4O75427 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms