Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.13■□□□□ 0.81
TRIM13O60858 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM13O60858 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM13O60858 RARRES2P11-201ENST00000635158 484 ntBASIC20.13■□□□□ 0.81
TRIM13O60858 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM13O60858 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM13O60858 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM13O60858 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM13O60858 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.13■□□□□ 0.81
TRIM13O60858 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 TCF3P1-201ENST00000423021 1937 ntBASIC20.12■□□□□ 0.81
TRIM13O60858 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
TRIM13O60858 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 MIR939-201ENST00000401314 82 ntBASIC20.12■□□□□ 0.81
TRIM13O60858 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM13O60858 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM13O60858 AC131212.1-201ENST00000613771 668 ntBASIC20.12■□□□□ 0.81
TRIM13O60858 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM13O60858 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM13O60858 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TRIM13O60858 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM13O60858 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM13O60858 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM13O60858 AC091305.1-201ENST00000479476 895 ntBASIC20.11■□□□□ 0.81
TRIM13O60858 AF213884.3-201ENST00000563833 479 ntBASIC20.11■□□□□ 0.81
TRIM13O60858 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM13O60858 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRIM13O60858 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM13O60858 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM13O60858 AL354811.1-201ENST00000610286 706 ntBASIC20.1■□□□□ 0.81
TRIM13O60858 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM13O60858 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM13O60858 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM13O60858 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM13O60858 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM13O60858 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM13O60858 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRIM13O60858 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TRIM13O60858 AC008406.3-201ENST00000620001 1374 ntBASIC20.09■□□□□ 0.81
TRIM13O60858 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM13O60858 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM13O60858 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM13O60858 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM13O60858 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRIM13O60858 AC245052.3-201ENST00000450182 901 ntBASIC20.09■□□□□ 0.81
TRIM13O60858 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM13O60858 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM13O60858 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRIM13O60858 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
TRIM13O60858 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM13O60858 KRT16P2-201ENST00000414673 1423 ntBASIC20.09■□□□□ 0.81
TRIM13O60858 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRIM13O60858 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM13O60858 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM13O60858 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.08■□□□□ 0.81
TRIM13O60858 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM13O60858 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM13O60858 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM13O60858 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRIM13O60858 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM13O60858 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TRIM13O60858 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms