Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CACNA1FO60840 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CACNA1FO60840 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.96■■□□□ 1.75
CACNA1FO60840 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
CACNA1FO60840 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CACNA1FO60840 RNA5SP413-201ENST00000516373 109 ntBASIC25.96■■□□□ 1.75
CACNA1FO60840 PNMA6B-201ENST00000538162 1200 ntBASIC25.96■■□□□ 1.75
CACNA1FO60840 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
CACNA1FO60840 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.96■■□□□ 1.75
CACNA1FO60840 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CACNA1FO60840 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
CACNA1FO60840 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
CACNA1FO60840 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
CACNA1FO60840 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CACNA1FO60840 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
CACNA1FO60840 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
CACNA1FO60840 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.95■■□□□ 1.75
CACNA1FO60840 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CACNA1FO60840 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CACNA1FO60840 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CACNA1FO60840 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CACNA1FO60840 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CACNA1FO60840 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.95■■□□□ 1.74
CACNA1FO60840 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CACNA1FO60840 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.95■■□□□ 1.74
CACNA1FO60840 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.95■■□□□ 1.74
CACNA1FO60840 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.95■■□□□ 1.74
CACNA1FO60840 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.95■■□□□ 1.74
CACNA1FO60840 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.95■■□□□ 1.74
CACNA1FO60840 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CACNA1FO60840 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.95■■□□□ 1.74
CACNA1FO60840 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CACNA1FO60840 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CACNA1FO60840 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CACNA1FO60840 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CACNA1FO60840 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CACNA1FO60840 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CACNA1FO60840 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
CACNA1FO60840 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CACNA1FO60840 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CACNA1FO60840 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CACNA1FO60840 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.94■■□□□ 1.74
CACNA1FO60840 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.93■■□□□ 1.74
CACNA1FO60840 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.93■■□□□ 1.74
CACNA1FO60840 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.93■■□□□ 1.74
CACNA1FO60840 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.93■■□□□ 1.74
CACNA1FO60840 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
CACNA1FO60840 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CACNA1FO60840 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.93■■□□□ 1.74
CACNA1FO60840 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CACNA1FO60840 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.93■■□□□ 1.74
CACNA1FO60840 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
CACNA1FO60840 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.93■■□□□ 1.74
CACNA1FO60840 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CACNA1FO60840 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CACNA1FO60840 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CACNA1FO60840 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CACNA1FO60840 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CACNA1FO60840 AC005229.4-201ENST00000610085 2198 ntBASIC25.92■■□□□ 1.74
CACNA1FO60840 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.91■■□□□ 1.74
CACNA1FO60840 AL121603.2-201ENST00000557373 2117 ntBASIC25.91■■□□□ 1.74
CACNA1FO60840 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.91■■□□□ 1.74
CACNA1FO60840 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.91■■□□□ 1.74
CACNA1FO60840 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.91■■□□□ 1.74
CACNA1FO60840 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CACNA1FO60840 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.91■■□□□ 1.74
CACNA1FO60840 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CACNA1FO60840 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CACNA1FO60840 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CACNA1FO60840 AC007225.1-201ENST00000566331 1836 ntBASIC25.9■■□□□ 1.74
CACNA1FO60840 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CACNA1FO60840 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.9■■□□□ 1.74
CACNA1FO60840 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CACNA1FO60840 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.9■■□□□ 1.74
CACNA1FO60840 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CACNA1FO60840 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CACNA1FO60840 AC008403.3-201ENST00000598924 454 ntBASIC25.89■■□□□ 1.74
CACNA1FO60840 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CACNA1FO60840 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CACNA1FO60840 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
CACNA1FO60840 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CACNA1FO60840 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms