Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KLHL41O60662 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 ID1-201ENST00000376105 1233 ntBASIC20.25■□□□□ 0.83
KLHL41O60662 KRT19P1-201ENST00000405746 1186 ntBASIC20.25■□□□□ 0.83
KLHL41O60662 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KLHL41O60662 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
KLHL41O60662 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
KLHL41O60662 AC007225.1-201ENST00000566331 1836 ntBASIC20.25■□□□□ 0.83
KLHL41O60662 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL41O60662 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL41O60662 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KLHL41O60662 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.24■□□□□ 0.83
KLHL41O60662 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL41O60662 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.24■□□□□ 0.83
KLHL41O60662 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL41O60662 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.24■□□□□ 0.83
KLHL41O60662 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.24■□□□□ 0.83
KLHL41O60662 AC137761.2-201ENST00000561729 223 ntBASIC20.24■□□□□ 0.83
KLHL41O60662 AC145350.3-201ENST00000569033 163 ntBASIC20.24■□□□□ 0.83
KLHL41O60662 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL41O60662 TPRG1LP1-201ENST00000598702 760 ntBASIC20.24■□□□□ 0.83
KLHL41O60662 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.24■□□□□ 0.83
KLHL41O60662 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL41O60662 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL41O60662 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL41O60662 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
KLHL41O60662 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL41O60662 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KLHL41O60662 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL41O60662 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.23■□□□□ 0.83
KLHL41O60662 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.23■□□□□ 0.83
KLHL41O60662 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL41O60662 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.23■□□□□ 0.83
KLHL41O60662 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.23■□□□□ 0.83
KLHL41O60662 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL41O60662 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL41O60662 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL41O60662 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL41O60662 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL41O60662 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KLHL41O60662 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL41O60662 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL41O60662 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL41O60662 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL41O60662 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL41O60662 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.22■□□□□ 0.83
KLHL41O60662 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
KLHL41O60662 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.22■□□□□ 0.83
KLHL41O60662 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.22■□□□□ 0.83
KLHL41O60662 KRT18P11-201ENST00000435214 1283 ntBASIC20.22■□□□□ 0.83
KLHL41O60662 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.22■□□□□ 0.83
KLHL41O60662 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KLHL41O60662 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL41O60662 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL41O60662 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
KLHL41O60662 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KLHL41O60662 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
KLHL41O60662 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KLHL41O60662 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.21■□□□□ 0.83
KLHL41O60662 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.21■□□□□ 0.83
KLHL41O60662 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.21■□□□□ 0.83
KLHL41O60662 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.21■□□□□ 0.83
KLHL41O60662 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KLHL41O60662 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.21■□□□□ 0.83
KLHL41O60662 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KLHL41O60662 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL41O60662 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
KLHL41O60662 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.2■□□□□ 0.82
KLHL41O60662 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.2■□□□□ 0.82
KLHL41O60662 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KLHL41O60662 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
KLHL41O60662 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.2■□□□□ 0.82
KLHL41O60662 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.2■□□□□ 0.82
KLHL41O60662 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 AC006015.1-201ENST00000429970 570 ntBASIC20.2■□□□□ 0.82
KLHL41O60662 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.2■□□□□ 0.82
KLHL41O60662 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.2■□□□□ 0.82
KLHL41O60662 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.2■□□□□ 0.82
KLHL41O60662 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.2■□□□□ 0.82
KLHL41O60662 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.2■□□□□ 0.82
KLHL41O60662 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL41O60662 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms