Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFRA3O60609 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.13■□□□□ 0.81
GFRA3O60609 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GFRA3O60609 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
GFRA3O60609 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFRA3O60609 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFRA3O60609 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFRA3O60609 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.13■□□□□ 0.81
GFRA3O60609 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GFRA3O60609 FAM207BP-201ENST00000447172 505 ntBASIC20.13■□□□□ 0.81
GFRA3O60609 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.13■□□□□ 0.81
GFRA3O60609 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.13■□□□□ 0.81
GFRA3O60609 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFRA3O60609 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.13■□□□□ 0.81
GFRA3O60609 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.13■□□□□ 0.81
GFRA3O60609 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFRA3O60609 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.12■□□□□ 0.81
GFRA3O60609 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.12■□□□□ 0.81
GFRA3O60609 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.12■□□□□ 0.81
GFRA3O60609 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.12■□□□□ 0.81
GFRA3O60609 AC092647.4-201ENST00000457211 535 ntBASIC20.12■□□□□ 0.81
GFRA3O60609 AC091390.4-202ENST00000476426 537 ntBASIC20.12■□□□□ 0.81
GFRA3O60609 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GFRA3O60609 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.12■□□□□ 0.81
GFRA3O60609 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.12■□□□□ 0.81
GFRA3O60609 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.12■□□□□ 0.81
GFRA3O60609 AC004263.2-201ENST00000617183 678 ntBASIC20.12■□□□□ 0.81
GFRA3O60609 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.12■□□□□ 0.81
GFRA3O60609 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GFRA3O60609 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
GFRA3O60609 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.11■□□□□ 0.81
GFRA3O60609 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GFRA3O60609 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.11■□□□□ 0.81
GFRA3O60609 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GFRA3O60609 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GFRA3O60609 AC022211.4-201ENST00000625094 2161 ntBASIC20.11■□□□□ 0.81
GFRA3O60609 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GFRA3O60609 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GFRA3O60609 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GFRA3O60609 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.11■□□□□ 0.81
GFRA3O60609 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GFRA3O60609 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
GFRA3O60609 RNF152P1-201ENST00000397754 604 ntBASIC20.11■□□□□ 0.81
GFRA3O60609 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.11■□□□□ 0.81
GFRA3O60609 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.11■□□□□ 0.81
GFRA3O60609 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.11■□□□□ 0.81
GFRA3O60609 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.11■□□□□ 0.81
GFRA3O60609 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.11■□□□□ 0.81
GFRA3O60609 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
GFRA3O60609 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.11■□□□□ 0.81
GFRA3O60609 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.11■□□□□ 0.81
GFRA3O60609 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.1■□□□□ 0.81
GFRA3O60609 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
GFRA3O60609 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GFRA3O60609 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.1■□□□□ 0.81
GFRA3O60609 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GFRA3O60609 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.1■□□□□ 0.81
GFRA3O60609 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GFRA3O60609 FAM86EP-206ENST00000510506 987 ntBASIC20.1■□□□□ 0.81
GFRA3O60609 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.1■□□□□ 0.81
GFRA3O60609 EGLN1P1-201ENST00000531623 762 ntBASIC20.1■□□□□ 0.81
GFRA3O60609 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GFRA3O60609 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GFRA3O60609 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.1■□□□□ 0.81
GFRA3O60609 AL121829.2-201ENST00000620908 328 ntBASIC20.1■□□□□ 0.81
GFRA3O60609 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.1■□□□□ 0.81
GFRA3O60609 AL121956.5-201ENST00000625261 221 ntBASIC20.1■□□□□ 0.81
GFRA3O60609 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GFRA3O60609 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
GFRA3O60609 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
GFRA3O60609 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GFRA3O60609 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
GFRA3O60609 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.09■□□□□ 0.81
GFRA3O60609 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GFRA3O60609 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.09■□□□□ 0.81
GFRA3O60609 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GFRA3O60609 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GFRA3O60609 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.09■□□□□ 0.81
GFRA3O60609 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.09■□□□□ 0.81
GFRA3O60609 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GFRA3O60609 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.08■□□□□ 0.81
GFRA3O60609 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.08■□□□□ 0.81
GFRA3O60609 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.08■□□□□ 0.81
GFRA3O60609 CR392000.1-201ENST00000624770 1228 ntBASIC20.08■□□□□ 0.81
GFRA3O60609 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
GFRA3O60609 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
GFRA3O60609 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GFRA3O60609 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GFRA3O60609 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
GFRA3O60609 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GFRA3O60609 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GFRA3O60609 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.07■□□□□ 0.8
GFRA3O60609 FDX1P1-201ENST00000449115 551 ntBASIC20.07■□□□□ 0.8
GFRA3O60609 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.07■□□□□ 0.8
GFRA3O60609 AC139887.4-201ENST00000607877 719 ntBASIC20.07■□□□□ 0.8
GFRA3O60609 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GFRA3O60609 AC012313.10-201ENST00000623509 926 ntBASIC20.07■□□□□ 0.8
GFRA3O60609 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.07■□□□□ 0.8
GFRA3O60609 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GFRA3O60609 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms