Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCMT2O60294 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.6■□□□□ 0.73
LCMT2O60294 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCMT2O60294 AL355472.2-201ENST00000422958 438 ntBASIC19.6■□□□□ 0.73
LCMT2O60294 NCF1B-203ENST00000435988 1254 ntBASIC19.6■□□□□ 0.73
LCMT2O60294 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.6■□□□□ 0.73
LCMT2O60294 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.6■□□□□ 0.73
LCMT2O60294 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCMT2O60294 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.6■□□□□ 0.73
LCMT2O60294 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCMT2O60294 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.6■□□□□ 0.73
LCMT2O60294 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCMT2O60294 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCMT2O60294 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LCMT2O60294 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCMT2O60294 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LCMT2O60294 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LCMT2O60294 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LCMT2O60294 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.59■□□□□ 0.73
LCMT2O60294 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.59■□□□□ 0.73
LCMT2O60294 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.59■□□□□ 0.73
LCMT2O60294 AL121832.2-201ENST00000610979 668 ntBASIC19.59■□□□□ 0.73
LCMT2O60294 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
LCMT2O60294 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
LCMT2O60294 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LCMT2O60294 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LCMT2O60294 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LCMT2O60294 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCMT2O60294 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.59■□□□□ 0.73
LCMT2O60294 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.59■□□□□ 0.73
LCMT2O60294 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.59■□□□□ 0.73
LCMT2O60294 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LCMT2O60294 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCMT2O60294 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
LCMT2O60294 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCMT2O60294 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LCMT2O60294 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCMT2O60294 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCMT2O60294 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCMT2O60294 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCMT2O60294 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.58■□□□□ 0.72
LCMT2O60294 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.58■□□□□ 0.72
LCMT2O60294 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.58■□□□□ 0.72
LCMT2O60294 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.58■□□□□ 0.72
LCMT2O60294 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.58■□□□□ 0.72
LCMT2O60294 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.58■□□□□ 0.72
LCMT2O60294 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
LCMT2O60294 AC100791.3-201ENST00000617619 330 ntBASIC19.58■□□□□ 0.72
LCMT2O60294 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCMT2O60294 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCMT2O60294 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCMT2O60294 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LCMT2O60294 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.58■□□□□ 0.72
LCMT2O60294 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.58■□□□□ 0.72
LCMT2O60294 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCMT2O60294 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCMT2O60294 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.58■□□□□ 0.72
LCMT2O60294 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LCMT2O60294 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCMT2O60294 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCMT2O60294 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCMT2O60294 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LCMT2O60294 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCMT2O60294 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LCMT2O60294 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCMT2O60294 MCRIP2P1-201ENST00000394346 511 ntBASIC19.57■□□□□ 0.72
LCMT2O60294 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.57■□□□□ 0.72
LCMT2O60294 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LCMT2O60294 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCMT2O60294 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.57■□□□□ 0.72
LCMT2O60294 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.57■□□□□ 0.72
LCMT2O60294 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.57■□□□□ 0.72
LCMT2O60294 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.57■□□□□ 0.72
LCMT2O60294 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.57■□□□□ 0.72
LCMT2O60294 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.57■□□□□ 0.72
LCMT2O60294 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
LCMT2O60294 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCMT2O60294 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCMT2O60294 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LCMT2O60294 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.56■□□□□ 0.72
LCMT2O60294 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LCMT2O60294 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.56■□□□□ 0.72
LCMT2O60294 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LCMT2O60294 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCMT2O60294 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LCMT2O60294 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms