Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TO15178 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.87■□□□□ 0.61
TO15178 AL121603.2-201ENST00000557373 2117 ntBASIC18.87■□□□□ 0.61
TO15178 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.87■□□□□ 0.61
TO15178 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.87■□□□□ 0.61
TO15178 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TO15178 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TO15178 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TO15178 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.86■□□□□ 0.61
TO15178 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TO15178 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TO15178 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TO15178 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 MKRN4P-201ENST00000444706 1521 ntBASIC18.86■□□□□ 0.61
TO15178 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.86■□□□□ 0.61
TO15178 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TO15178 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.86■□□□□ 0.61
TO15178 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TO15178 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.86■□□□□ 0.61
TO15178 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.86■□□□□ 0.61
TO15178 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.86■□□□□ 0.61
TO15178 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.86■□□□□ 0.61
TO15178 AC007225.1-201ENST00000566331 1836 ntBASIC18.86■□□□□ 0.61
TO15178 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.85■□□□□ 0.61
TO15178 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TO15178 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.85■□□□□ 0.61
TO15178 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TO15178 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.85■□□□□ 0.61
TO15178 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TO15178 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
TO15178 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.85■□□□□ 0.61
TO15178 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TO15178 KRT18P68-201ENST00000392293 1000 ntBASIC18.85■□□□□ 0.61
TO15178 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TO15178 GUSBP6-202ENST00000438529 1198 ntBASIC18.85■□□□□ 0.61
TO15178 TSPY6P-201ENST00000448518 926 ntBASIC18.85■□□□□ 0.61
TO15178 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.85■□□□□ 0.61
TO15178 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.85■□□□□ 0.61
TO15178 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.85■□□□□ 0.61
TO15178 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
TO15178 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TO15178 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TO15178 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.85■□□□□ 0.61
TO15178 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TO15178 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.85■□□□□ 0.61
TO15178 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TO15178 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 KRT8P36-201ENST00000489121 1440 ntBASIC18.84■□□□□ 0.61
TO15178 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.84■□□□□ 0.61
TO15178 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TO15178 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.84■□□□□ 0.61
TO15178 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.84■□□□□ 0.61
TO15178 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.84■□□□□ 0.61
TO15178 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.84■□□□□ 0.61
TO15178 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.84■□□□□ 0.61
TO15178 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TO15178 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TO15178 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TO15178 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TO15178 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TO15178 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TO15178 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TO15178 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TO15178 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
TO15178 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TO15178 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TO15178 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.83■□□□□ 0.6
TO15178 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.83■□□□□ 0.6
TO15178 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TO15178 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TO15178 AL356652.1-201ENST00000615962 565 ntBASIC18.83■□□□□ 0.6
TO15178 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
TO15178 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.83■□□□□ 0.6
TO15178 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TO15178 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.82■□□□□ 0.6
TO15178 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TO15178 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TO15178 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TO15178 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TO15178 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TO15178 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TO15178 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms