Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 AL049796.1-201ENST00000565336 1766 ntBASIC19.51■□□□□ 0.71
PCDH17O14917 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDH17O14917 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH17O14917 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH17O14917 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PCDH17O14917 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH17O14917 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PCDH17O14917 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH17O14917 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH17O14917 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDH17O14917 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDH17O14917 MIR4758-201ENST00000577688 71 ntBASIC19.5■□□□□ 0.71
PCDH17O14917 FAM21FP-204ENST00000608637 956 ntBASIC19.5■□□□□ 0.71
PCDH17O14917 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
PCDH17O14917 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH17O14917 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PCDH17O14917 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDH17O14917 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDH17O14917 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH17O14917 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 RARRES2P4-201ENST00000514074 484 ntBASIC19.49■□□□□ 0.71
PCDH17O14917 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PCDH17O14917 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.49■□□□□ 0.71
PCDH17O14917 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.49■□□□□ 0.71
PCDH17O14917 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDH17O14917 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH17O14917 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDH17O14917 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDH17O14917 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH17O14917 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH17O14917 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH17O14917 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 MKRN4P-201ENST00000444706 1521 ntBASIC19.48■□□□□ 0.71
PCDH17O14917 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH17O14917 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.48■□□□□ 0.71
PCDH17O14917 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.48■□□□□ 0.71
PCDH17O14917 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PCDH17O14917 AC100791.3-201ENST00000617619 330 ntBASIC19.48■□□□□ 0.71
PCDH17O14917 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH17O14917 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH17O14917 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH17O14917 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH17O14917 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH17O14917 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.47■□□□□ 0.71
PCDH17O14917 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.47■□□□□ 0.71
PCDH17O14917 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH17O14917 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH17O14917 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH17O14917 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH17O14917 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH17O14917 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms