Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CYP21A1P-202ENST00000354927 1481 ntBASIC35.46■■■■□ 3.27
CUX2O14529 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
CUX2O14529 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC35.46■■■■□ 3.27
CUX2O14529 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CUX2O14529 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC35.46■■■■□ 3.27
CUX2O14529 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
CUX2O14529 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CUX2O14529 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC35.45■■■■□ 3.27
CUX2O14529 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC35.45■■■■□ 3.27
CUX2O14529 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CUX2O14529 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CUX2O14529 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CUX2O14529 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
CUX2O14529 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC35.45■■■■□ 3.27
CUX2O14529 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC35.45■■■■□ 3.27
CUX2O14529 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC35.45■■■■□ 3.27
CUX2O14529 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CUX2O14529 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CUX2O14529 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
CUX2O14529 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.26
CUX2O14529 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC35.44■■■■□ 3.26
CUX2O14529 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC35.44■■■■□ 3.26
CUX2O14529 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC35.44■■■■□ 3.26
CUX2O14529 LIN28AP1-201ENST00000429574 405 ntBASIC35.44■■■■□ 3.26
CUX2O14529 AC246785.2-201ENST00000432512 513 ntBASIC35.44■■■■□ 3.26
CUX2O14529 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC35.44■■■■□ 3.26
CUX2O14529 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC35.44■■■■□ 3.26
CUX2O14529 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC35.44■■■■□ 3.26
CUX2O14529 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CUX2O14529 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CUX2O14529 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC35.44■■■■□ 3.26
CUX2O14529 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CUX2O14529 RARG-204ENST00000543726 1779 ntTSL 2 BASIC35.44■■■■□ 3.26
CUX2O14529 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CUX2O14529 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
CUX2O14529 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CUX2O14529 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CUX2O14529 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC35.43■■■■□ 3.26
CUX2O14529 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC35.43■■■■□ 3.26
CUX2O14529 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC35.43■■■■□ 3.26
CUX2O14529 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC35.42■■■■□ 3.26
CUX2O14529 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
CUX2O14529 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
CUX2O14529 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC35.42■■■■□ 3.26
CUX2O14529 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC35.42■■■■□ 3.26
CUX2O14529 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
CUX2O14529 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CUX2O14529 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC35.41■■■■□ 3.26
CUX2O14529 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CUX2O14529 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.26
CUX2O14529 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC35.41■■■■□ 3.26
CUX2O14529 HCG4P8-203ENST00000443049 980 ntBASIC35.41■■■■□ 3.26
CUX2O14529 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC35.41■■■■□ 3.26
CUX2O14529 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CUX2O14529 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC35.41■■■■□ 3.26
CUX2O14529 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CUX2O14529 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CUX2O14529 ATP5G1P1-201ENST00000448724 379 ntBASIC35.41■■■■□ 3.26
CUX2O14529 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CUX2O14529 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC35.41■■■■□ 3.26
CUX2O14529 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC35.41■■■■□ 3.26
CUX2O14529 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC35.41■■■■□ 3.26
CUX2O14529 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CUX2O14529 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CUX2O14529 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CUX2O14529 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CUX2O14529 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC35.4■■■■□ 3.26
CUX2O14529 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC35.4■■■■□ 3.26
CUX2O14529 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC35.4■■■■□ 3.26
CUX2O14529 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC35.4■■■■□ 3.26
CUX2O14529 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC35.4■■■■□ 3.26
CUX2O14529 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
CUX2O14529 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CUX2O14529 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CUX2O14529 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CUX2O14529 AC116562.2-201ENST00000507042 360 ntBASIC35.39■■■■□ 3.26
CUX2O14529 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC35.39■■■■□ 3.26
CUX2O14529 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC35.39■■■■□ 3.26
CUX2O14529 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CUX2O14529 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CUX2O14529 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC35.39■■■■□ 3.26
CUX2O14529 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CUX2O14529 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CUX2O14529 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC35.38■■■■□ 3.25
CUX2O14529 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CUX2O14529 SERP1-205ENST00000487153 657 ntTSL 4 BASIC35.38■■■■□ 3.25
CUX2O14529 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC35.38■■■■□ 3.25
CUX2O14529 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
CUX2O14529 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CUX2O14529 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC35.37■■■■□ 3.25
CUX2O14529 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CUX2O14529 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC35.36■■■■□ 3.25
CUX2O14529 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC35.36■■■■□ 3.25
CUX2O14529 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC35.36■■■■□ 3.25
CUX2O14529 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC35.36■■■■□ 3.25
CUX2O14529 BX664615.1-201ENST00000443558 458 ntBASIC35.36■■■■□ 3.25
CUX2O14529 AC245052.3-201ENST00000450182 901 ntBASIC35.36■■■■□ 3.25
CUX2O14529 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
CUX2O14529 MED25-212ENST00000618715 1467 ntTSL 5 BASIC35.36■■■■□ 3.25
CUX2O14529 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms