Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CACNA1AO00555 AL671277.2-201ENST00000458060 996 ntBASIC19.57■□□□□ 0.72
CACNA1AO00555 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1AO00555 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1AO00555 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CACNA1AO00555 TSPY21P-201ENST00000433481 731 ntBASIC19.56■□□□□ 0.72
CACNA1AO00555 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1AO00555 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.56■□□□□ 0.72
CACNA1AO00555 TSPY23P-201ENST00000440136 739 ntBASIC19.56■□□□□ 0.72
CACNA1AO00555 AC245052.3-201ENST00000450182 901 ntBASIC19.56■□□□□ 0.72
CACNA1AO00555 AP002982.1-201ENST00000492365 877 ntBASIC19.56■□□□□ 0.72
CACNA1AO00555 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CACNA1AO00555 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CACNA1AO00555 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1AO00555 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1AO00555 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CACNA1AO00555 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1AO00555 AL022342.1-201ENST00000400363 863 ntBASIC19.56■□□□□ 0.72
CACNA1AO00555 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1AO00555 EGLN1P1-201ENST00000531623 762 ntBASIC19.56■□□□□ 0.72
CACNA1AO00555 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.56■□□□□ 0.72
CACNA1AO00555 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1AO00555 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.55■□□□□ 0.72
CACNA1AO00555 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CACNA1AO00555 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1AO00555 AC005332.1-201ENST00000577698 1310 ntBASIC19.55■□□□□ 0.72
CACNA1AO00555 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CACNA1AO00555 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.55■□□□□ 0.72
CACNA1AO00555 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
CACNA1AO00555 AL121829.2-201ENST00000620908 328 ntBASIC19.55■□□□□ 0.72
CACNA1AO00555 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1AO00555 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.54■□□□□ 0.72
CACNA1AO00555 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.54■□□□□ 0.72
CACNA1AO00555 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
CACNA1AO00555 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.54■□□□□ 0.72
CACNA1AO00555 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1AO00555 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CACNA1AO00555 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1AO00555 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CACNA1AO00555 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CACNA1AO00555 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1AO00555 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1AO00555 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1AO00555 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1AO00555 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.54■□□□□ 0.72
CACNA1AO00555 AC111152.3-201ENST00000569699 673 ntBASIC19.54■□□□□ 0.72
CACNA1AO00555 AC004264.1-201ENST00000608354 794 ntBASIC19.54■□□□□ 0.72
CACNA1AO00555 DUSP8P4-201ENST00000399538 1761 ntBASIC19.54■□□□□ 0.72
CACNA1AO00555 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 TSPY5P-201ENST00000426936 936 ntBASIC19.53■□□□□ 0.72
CACNA1AO00555 AC244107.1-201ENST00000442033 332 ntBASIC19.53■□□□□ 0.72
CACNA1AO00555 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
CACNA1AO00555 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1AO00555 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.53■□□□□ 0.72
CACNA1AO00555 KSR1P1-201ENST00000446298 240 ntBASIC19.53■□□□□ 0.72
CACNA1AO00555 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1AO00555 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
CACNA1AO00555 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNA1AO00555 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1AO00555 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNA1AO00555 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1AO00555 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNA1AO00555 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.52■□□□□ 0.72
CACNA1AO00555 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.52■□□□□ 0.72
CACNA1AO00555 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNA1AO00555 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1AO00555 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.52■□□□□ 0.71
CACNA1AO00555 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.52■□□□□ 0.71
CACNA1AO00555 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1AO00555 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.52■□□□□ 0.71
CACNA1AO00555 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.52■□□□□ 0.71
CACNA1AO00555 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1AO00555 AC012313.10-201ENST00000623509 926 ntBASIC19.52■□□□□ 0.71
CACNA1AO00555 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1AO00555 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.51■□□□□ 0.71
CACNA1AO00555 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms