Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.71■□□□□ 0.11
NDUFA4O00483 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.71■□□□□ 0.11
NDUFA4O00483 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
NDUFA4O00483 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.71■□□□□ 0.11
NDUFA4O00483 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NDUFA4O00483 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NDUFA4O00483 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NDUFA4O00483 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.71■□□□□ 0.1
NDUFA4O00483 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NDUFA4O00483 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NDUFA4O00483 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NDUFA4O00483 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.7■□□□□ 0.1
NDUFA4O00483 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NDUFA4O00483 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NDUFA4O00483 AC007322.1-201ENST00000426983 750 ntBASIC15.7■□□□□ 0.1
NDUFA4O00483 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NDUFA4O00483 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
NDUFA4O00483 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NDUFA4O00483 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA4O00483 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NDUFA4O00483 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
NDUFA4O00483 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NDUFA4O00483 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NDUFA4O00483 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NDUFA4O00483 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
NDUFA4O00483 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
NDUFA4O00483 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA4O00483 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NDUFA4O00483 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 CNN2P6-201ENST00000439038 900 ntBASIC15.69■□□□□ 0.1
NDUFA4O00483 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA4O00483 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA4O00483 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.69■□□□□ 0.1
NDUFA4O00483 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.69■□□□□ 0.1
NDUFA4O00483 AL137784.2-201ENST00000607332 1000 ntBASIC15.69■□□□□ 0.1
NDUFA4O00483 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA4O00483 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA4O00483 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA4O00483 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.69■□□□□ 0.1
NDUFA4O00483 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NDUFA4O00483 GABARAPL3-202ENST00000624044 1851 ntBASIC15.69■□□□□ 0.1
NDUFA4O00483 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA4O00483 AC068338.2-201ENST00000563278 1430 ntBASIC15.68■□□□□ 0.1
NDUFA4O00483 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA4O00483 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA4O00483 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA4O00483 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NDUFA4O00483 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
NDUFA4O00483 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.68■□□□□ 0.1
NDUFA4O00483 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.68■□□□□ 0.1
NDUFA4O00483 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA4O00483 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.68■□□□□ 0.1
NDUFA4O00483 AC069236.1-201ENST00000604339 616 ntBASIC15.68■□□□□ 0.1
NDUFA4O00483 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA4O00483 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.68■□□□□ 0.1
NDUFA4O00483 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NDUFA4O00483 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA4O00483 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NDUFA4O00483 LINC01521-201ENST00000504184 1943 ntBASIC15.68■□□□□ 0.1
NDUFA4O00483 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDUFA4O00483 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NDUFA4O00483 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.68■□□□□ 0.1
NDUFA4O00483 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA4O00483 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms