Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1AO00322 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1AO00322 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1AO00322 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.41■□□□□ 0.7
UPK1AO00322 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 RARRES2P6-201ENST00000567333 442 ntBASIC19.41■□□□□ 0.7
UPK1AO00322 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.41■□□□□ 0.7
UPK1AO00322 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.41■□□□□ 0.7
UPK1AO00322 RARRES2P11-201ENST00000635158 484 ntBASIC19.41■□□□□ 0.7
UPK1AO00322 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1AO00322 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UPK1AO00322 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.4■□□□□ 0.7
UPK1AO00322 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 AC121338.2-201ENST00000622535 1744 ntBASIC19.4■□□□□ 0.7
UPK1AO00322 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
UPK1AO00322 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.4■□□□□ 0.7
UPK1AO00322 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
UPK1AO00322 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 AL512408.1-201ENST00000569378 2000 ntBASIC19.4■□□□□ 0.7
UPK1AO00322 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.4■□□□□ 0.7
UPK1AO00322 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1AO00322 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
UPK1AO00322 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UPK1AO00322 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UPK1AO00322 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
UPK1AO00322 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.39■□□□□ 0.69
UPK1AO00322 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.39■□□□□ 0.69
UPK1AO00322 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.39■□□□□ 0.69
UPK1AO00322 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.39■□□□□ 0.69
UPK1AO00322 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UPK1AO00322 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1AO00322 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
UPK1AO00322 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
UPK1AO00322 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.38■□□□□ 0.69
UPK1AO00322 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.38■□□□□ 0.69
UPK1AO00322 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
UPK1AO00322 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.38■□□□□ 0.69
UPK1AO00322 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.38■□□□□ 0.69
UPK1AO00322 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1AO00322 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.37■□□□□ 0.69
UPK1AO00322 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK1AO00322 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.37■□□□□ 0.69
UPK1AO00322 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK1AO00322 AC245052.3-201ENST00000450182 901 ntBASIC19.37■□□□□ 0.69
UPK1AO00322 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.37■□□□□ 0.69
UPK1AO00322 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1AO00322 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UPK1AO00322 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms