Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.31■□□□□ 0.84
TLR4O00206 AC105020.6-201ENST00000621523 1217 ntBASIC20.31■□□□□ 0.84
TLR4O00206 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TLR4O00206 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TLR4O00206 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TLR4O00206 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.31■□□□□ 0.84
TLR4O00206 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TLR4O00206 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TLR4O00206 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TLR4O00206 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TLR4O00206 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TLR4O00206 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.3■□□□□ 0.84
TLR4O00206 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.3■□□□□ 0.84
TLR4O00206 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.3■□□□□ 0.84
TLR4O00206 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TLR4O00206 AL596275.1-201ENST00000423464 877 ntBASIC20.3■□□□□ 0.84
TLR4O00206 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.3■□□□□ 0.84
TLR4O00206 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.3■□□□□ 0.84
TLR4O00206 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.3■□□□□ 0.84
TLR4O00206 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.3■□□□□ 0.84
TLR4O00206 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TLR4O00206 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.3■□□□□ 0.84
TLR4O00206 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.3■□□□□ 0.84
TLR4O00206 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TLR4O00206 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TLR4O00206 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.29■□□□□ 0.84
TLR4O00206 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.29■□□□□ 0.84
TLR4O00206 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.29■□□□□ 0.84
TLR4O00206 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.29■□□□□ 0.84
TLR4O00206 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.29■□□□□ 0.84
TLR4O00206 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.29■□□□□ 0.84
TLR4O00206 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.29■□□□□ 0.84
TLR4O00206 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TLR4O00206 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR4O00206 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR4O00206 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR4O00206 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR4O00206 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR4O00206 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TLR4O00206 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.28■□□□□ 0.84
TLR4O00206 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR4O00206 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR4O00206 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.28■□□□□ 0.84
TLR4O00206 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.28■□□□□ 0.84
TLR4O00206 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR4O00206 AC008550.1-201ENST00000511500 884 ntBASIC20.28■□□□□ 0.84
TLR4O00206 RPPH1-201ENST00000516869 333 ntBASIC20.28■□□□□ 0.84
TLR4O00206 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR4O00206 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TLR4O00206 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.28■□□□□ 0.84
TLR4O00206 SOX15-203ENST00000570788 1093 ntBASIC20.28■□□□□ 0.84
TLR4O00206 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TLR4O00206 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.27■□□□□ 0.84
TLR4O00206 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.27■□□□□ 0.84
TLR4O00206 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.27■□□□□ 0.84
TLR4O00206 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.27■□□□□ 0.84
TLR4O00206 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.27■□□□□ 0.84
TLR4O00206 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.27■□□□□ 0.84
TLR4O00206 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.27■□□□□ 0.84
TLR4O00206 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TLR4O00206 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.27■□□□□ 0.84
TLR4O00206 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.27■□□□□ 0.84
TLR4O00206 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.27■□□□□ 0.84
TLR4O00206 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
TLR4O00206 FAM197Y4-202ENST00000622692 608 ntBASIC20.27■□□□□ 0.84
TLR4O00206 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
TLR4O00206 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR4O00206 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TLR4O00206 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TLR4O00206 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms