Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 TSPY6P-201ENST00000448518 926 ntBASIC21.15■□□□□ 0.98
SRRM3A6NNA2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 AC027702.1-201ENST00000563810 1770 ntBASIC21.15■□□□□ 0.98
SRRM3A6NNA2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRRM3A6NNA2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.14■□□□□ 0.98
SRRM3A6NNA2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRRM3A6NNA2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SRRM3A6NNA2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SRRM3A6NNA2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRRM3A6NNA2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.14■□□□□ 0.98
SRRM3A6NNA2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.14■□□□□ 0.97
SRRM3A6NNA2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 AC083906.2-201ENST00000511578 360 ntBASIC21.13■□□□□ 0.97
SRRM3A6NNA2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM3A6NNA2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 AC004854.2-201ENST00000608450 1441 ntBASIC21.12■□□□□ 0.97
SRRM3A6NNA2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 AC069152.1-201ENST00000438030 544 ntBASIC21.12■□□□□ 0.97
SRRM3A6NNA2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SRRM3A6NNA2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 AL138781.1-201ENST00000566567 1274 ntBASIC21.11■□□□□ 0.97
SRRM3A6NNA2 TPRG1LP1-201ENST00000598702 760 ntBASIC21.11■□□□□ 0.97
SRRM3A6NNA2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SRRM3A6NNA2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 PLK5-205ENST00000642079 1969 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms