Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 AC245052.3-201ENST00000450182 901 ntBASIC16.35■□□□□ 0.21
CGB1A6NKQ9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.35■□□□□ 0.21
CGB1A6NKQ9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 AC120498.10-201ENST00000621827 505 ntBASIC16.34■□□□□ 0.21
CGB1A6NKQ9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.34■□□□□ 0.21
CGB1A6NKQ9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.21
CGB1A6NKQ9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.33■□□□□ 0.21
CGB1A6NKQ9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.33■□□□□ 0.21
CGB1A6NKQ9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CGB1A6NKQ9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CGB1A6NKQ9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.33■□□□□ 0.21
CGB1A6NKQ9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CGB1A6NKQ9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CGB1A6NKQ9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 AL162377.1-201ENST00000618844 1793 ntBASIC16.33■□□□□ 0.2
CGB1A6NKQ9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 AL512408.1-201ENST00000569378 2000 ntBASIC16.33■□□□□ 0.2
CGB1A6NKQ9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.33■□□□□ 0.2
CGB1A6NKQ9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.32■□□□□ 0.2
CGB1A6NKQ9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms