Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.24■□□□□ 0.51
TVP23AA6NH52 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TVP23AA6NH52 SLC7A5P2-201ENST00000553010 536 ntBASIC18.24■□□□□ 0.51
TVP23AA6NH52 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.24■□□□□ 0.51
TVP23AA6NH52 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 AC120498.10-201ENST00000621827 505 ntBASIC18.24■□□□□ 0.51
TVP23AA6NH52 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.24■□□□□ 0.51
TVP23AA6NH52 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TVP23AA6NH52 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TVP23AA6NH52 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 KRT16P2-201ENST00000414673 1423 ntBASIC18.23■□□□□ 0.51
TVP23AA6NH52 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TVP23AA6NH52 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TVP23AA6NH52 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TVP23AA6NH52 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TVP23AA6NH52 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TVP23AA6NH52 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 DUX4L2-201ENST00000561772 1275 ntBASIC18.22■□□□□ 0.51
TVP23AA6NH52 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 DUX4L6-201ENST00000626483 1275 ntBASIC18.22■□□□□ 0.51
TVP23AA6NH52 DUX4L1-201ENST00000627662 1275 ntBASIC18.22■□□□□ 0.51
TVP23AA6NH52 DUX4L8-201ENST00000629013 1275 ntBASIC18.22■□□□□ 0.51
TVP23AA6NH52 DUX4L3-201ENST00000630187 1275 ntBASIC18.22■□□□□ 0.51
TVP23AA6NH52 DUX4L7-201ENST00000630678 1275 ntBASIC18.22■□□□□ 0.51
TVP23AA6NH52 DUX4L5-201ENST00000630834 1275 ntBASIC18.22■□□□□ 0.51
TVP23AA6NH52 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TVP23AA6NH52 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TVP23AA6NH52 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TVP23AA6NH52 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.22■□□□□ 0.51
TVP23AA6NH52 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TVP23AA6NH52 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 AP001160.3-201ENST00000601484 763 ntBASIC18.21■□□□□ 0.51
TVP23AA6NH52 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 AFG3L1P-217ENST00000557444 2447 ntBASIC18.21■□□□□ 0.51
TVP23AA6NH52 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TVP23AA6NH52 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.21■□□□□ 0.51
TVP23AA6NH52 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.21■□□□□ 0.5
TVP23AA6NH52 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
TVP23AA6NH52 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms