Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SBNO1A3KN83 MOK-233ENST00000524214 1539 ntTSL 2 BASIC28.01■■■□□ 2.07
SBNO1A3KN83 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
SBNO1A3KN83 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
SBNO1A3KN83 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SBNO1A3KN83 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC28.01■■■□□ 2.07
SBNO1A3KN83 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC28.01■■■□□ 2.07
SBNO1A3KN83 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SBNO1A3KN83 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC28■■■□□ 2.07
SBNO1A3KN83 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC28■■■□□ 2.07
SBNO1A3KN83 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC28■■■□□ 2.07
SBNO1A3KN83 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC28■■■□□ 2.07
SBNO1A3KN83 GRAP-204ENST00000573099 846 ntTSL 3 BASIC28■■■□□ 2.07
SBNO1A3KN83 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC28■■■□□ 2.07
SBNO1A3KN83 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC28■■■□□ 2.07
SBNO1A3KN83 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
SBNO1A3KN83 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
SBNO1A3KN83 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC28■■■□□ 2.07
SBNO1A3KN83 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
SBNO1A3KN83 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC28■■■□□ 2.07
SBNO1A3KN83 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC28■■■□□ 2.07
SBNO1A3KN83 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SBNO1A3KN83 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC28■■■□□ 2.07
SBNO1A3KN83 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
SBNO1A3KN83 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC27.99■■■□□ 2.07
SBNO1A3KN83 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC27.99■■■□□ 2.07
SBNO1A3KN83 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC27.99■■■□□ 2.07
SBNO1A3KN83 RN7SL850P-201ENST00000579959 291 ntBASIC27.99■■■□□ 2.07
SBNO1A3KN83 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC27.99■■■□□ 2.07
SBNO1A3KN83 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.99■■■□□ 2.07
SBNO1A3KN83 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
SBNO1A3KN83 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SBNO1A3KN83 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC27.99■■■□□ 2.07
SBNO1A3KN83 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SBNO1A3KN83 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
SBNO1A3KN83 TMPOP1-202ENST00000424642 1267 ntBASIC27.99■■■□□ 2.07
SBNO1A3KN83 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SBNO1A3KN83 AC026471.5-201ENST00000615068 467 ntBASIC27.99■■■□□ 2.07
SBNO1A3KN83 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SBNO1A3KN83 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.98■■■□□ 2.07
SBNO1A3KN83 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SBNO1A3KN83 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SBNO1A3KN83 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.98■■■□□ 2.07
SBNO1A3KN83 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SBNO1A3KN83 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SBNO1A3KN83 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC27.98■■■□□ 2.07
SBNO1A3KN83 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC27.98■■■□□ 2.07
SBNO1A3KN83 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC27.98■■■□□ 2.07
SBNO1A3KN83 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC27.97■■■□□ 2.07
SBNO1A3KN83 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.97■■■□□ 2.07
SBNO1A3KN83 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC27.97■■■□□ 2.07
SBNO1A3KN83 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC27.97■■■□□ 2.07
SBNO1A3KN83 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SBNO1A3KN83 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SBNO1A3KN83 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC27.96■■■□□ 2.07
SBNO1A3KN83 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
SBNO1A3KN83 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.96■■■□□ 2.07
SBNO1A3KN83 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.96■■■□□ 2.07
SBNO1A3KN83 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
SBNO1A3KN83 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SBNO1A3KN83 PGM5P4-201ENST00000421970 445 ntBASIC27.96■■■□□ 2.07
SBNO1A3KN83 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC27.96■■■□□ 2.07
SBNO1A3KN83 KRT18P35-201ENST00000510488 1269 ntBASIC27.96■■■□□ 2.07
SBNO1A3KN83 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SBNO1A3KN83 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SBNO1A3KN83 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC27.95■■■□□ 2.07
SBNO1A3KN83 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC27.95■■■□□ 2.07
SBNO1A3KN83 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SBNO1A3KN83 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
SBNO1A3KN83 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC27.95■■■□□ 2.06
SBNO1A3KN83 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SBNO1A3KN83 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
SBNO1A3KN83 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC27.95■■■□□ 2.06
SBNO1A3KN83 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SBNO1A3KN83 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SBNO1A3KN83 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SBNO1A3KN83 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
SBNO1A3KN83 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SBNO1A3KN83 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC27.94■■■□□ 2.06
SBNO1A3KN83 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
SBNO1A3KN83 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SBNO1A3KN83 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SBNO1A3KN83 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
SBNO1A3KN83 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC27.94■■■□□ 2.06
SBNO1A3KN83 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC27.94■■■□□ 2.06
SBNO1A3KN83 AP003071.4-201ENST00000562276 1284 ntBASIC27.94■■■□□ 2.06
SBNO1A3KN83 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC27.94■■■□□ 2.06
SBNO1A3KN83 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SBNO1A3KN83 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC27.94■■■□□ 2.06
SBNO1A3KN83 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC27.94■■■□□ 2.06
SBNO1A3KN83 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SBNO1A3KN83 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms