Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 KRT18P6-201ENST00000555540 1265 ntBASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 KRT17P1-201ENST00000399211 1546 ntBASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV4-28A0A0C4DH34 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 CYP21A1P-202ENST00000354927 1481 ntBASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 DUSP5P2-201ENST00000426873 1033 ntBASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 CD99P1-205ENST00000527459 561 ntBASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 AL589743.5-201ENST00000616611 1050 ntBASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGHV4-28A0A0C4DH34 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 KRT18P68-201ENST00000392293 1000 ntBASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 AC097658.1-201ENST00000475555 843 ntBASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGHV4-28A0A0C4DH34 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IGHV4-28A0A0C4DH34 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC091874.3-201ENST00000512672 1195 ntBASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
IGHV4-28A0A0C4DH34 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 AL049796.1-201ENST00000565336 1766 ntBASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms