Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV34A0A0B4J273 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 AC099778.1-201ENST00000568593 1911 ntBASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV34A0A0B4J273 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
TRAV34A0A0B4J273 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV34A0A0B4J273 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 LETM1P2-201ENST00000597330 2178 ntBASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 AL162377.1-201ENST00000618844 1793 ntBASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms