Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 GABARAPL3-202ENST00000624044 1851 ntBASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 AP005212.1-201ENST00000581547 1997 ntBASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 AC245052.3-201ENST00000450182 901 ntBASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-3A0A0B4J271 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 KRT16P2-201ENST00000414673 1423 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 AC123595.1-201ENST00000440769 1046 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 YBX1P1-201ENST00000445822 960 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 AC010141.2-201ENST00000452426 721 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DUX4L2-201ENST00000561772 1275 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DUX4L6-201ENST00000626483 1275 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DUX4L1-201ENST00000627662 1275 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DUX4L8-201ENST00000629013 1275 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DUX4L3-201ENST00000630187 1275 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DUX4L7-201ENST00000630678 1275 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 DUX4L5-201ENST00000630834 1275 ntBASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV12-3A0A0B4J271 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 AC027702.1-201ENST00000563810 1770 ntBASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 TERF1P2-201ENST00000583350 1212 ntBASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 AP001160.3-201ENST00000601484 763 ntBASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms