Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 AC123595.1-201ENST00000440769 1046 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 AC245052.3-201ENST00000450182 901 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 SLC7A5P2-201ENST00000553010 536 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DUX4L2-201ENST00000561772 1275 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 TERF1P2-201ENST00000583350 1212 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DUX4L6-201ENST00000626483 1275 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DUX4L1-201ENST00000627662 1275 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DUX4L8-201ENST00000629013 1275 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DUX4L3-201ENST00000630187 1275 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DUX4L7-201ENST00000630678 1275 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DUX4L5-201ENST00000630834 1275 ntBASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-2A0A0B4J237 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 AP001160.3-201ENST00000601484 763 ntBASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 AC120498.10-201ENST00000621827 505 ntBASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-2A0A0B4J237 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 YBX1P1-201ENST00000445822 960 ntBASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 AL512408.1-201ENST00000569378 2000 ntBASIC15.5■□□□□ 0.07
TRAV8-2A0A0B4J237 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 AL162377.1-201ENST00000618844 1793 ntBASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms