Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC079174.2-201ENST00000611145 2028 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 RFPL1-201ENST00000354373 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 ARL6-202ENST00000394206 1590 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 CU634019.1-201ENST00000623095 2247 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 CU633904.1-202ENST00000625096 2247 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 RPL12P38-202ENST00000588627 2319 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 AL590004.4-201ENST00000566733 7060 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 AL049833.3-201ENST00000623920 3738 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 THAP12P6-201ENST00000431978 2310 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 SP100-202ENST00000340126 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 SRSF10-206ENST00000374453 866 ntTSL 5 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 SNORA42.2-201ENST00000384771 134 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC108059.1-201ENST00000411629 725 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC010880.1-202ENST00000427950 432 ntTSL 3 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC244098.1-201ENST00000436499 275 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 AL662795.1-201ENST00000448756 634 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 AL513542.1-201ENST00000452494 731 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 RN7SL535P-201ENST00000479087 296 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC106872.7-201ENST00000508621 312 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC113355.1-201ENST00000510512 491 ntTSL 3 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC099509.2-201ENST00000513926 406 ntTSL 3 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 WBP1LP2-201ENST00000515260 998 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 IGLV3-13-201ENST00000518475 223 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 TRAPPC4-206ENST00000525303 654 ntTSL 2 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 AP003031.1-201ENST00000534354 758 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC112694.1-201ENST00000541939 570 ntTSL 4 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 GABRB3-205ENST00000545868 1267 ntTSL 5 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC092718.2-203ENST00000561808 789 ntTSL 3 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 UBBP4-201ENST00000583708 689 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 FXYD1-206ENST00000588715 486 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 CYP2A7P2-201ENST00000600605 641 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 Metazoa_SRP.110-201ENST00000611670 282 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 RN7SL650P-201ENST00000619902 299 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 AC090616.7-201ENST00000625123 2179 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.29□□□□□ -1.08
SNX18Q96RF0 ATG4A-202ENST00000345734 2129 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.29□□□□□ -1.08
SNX18Q96RF0 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNX18Q96RF0 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC134508.1-201ENST00000570082 2977 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC138409.1-201ENST00000505001 3598 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 MAPK10-279ENST00000641157 2449 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 FBXW12-202ENST00000415155 1370 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 EEF1A1P19-201ENST00000513637 1382 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 Metazoa_SRP.3-201ENST00000366116 282 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms