Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.851e-6■■□□□ 14.5
PRPF8Q6P2Q9 ORMDL1-205ENST00000442547 893 ntTSL 53.42□□□□□ -1.862e-9■■□□□ 14.5
PRPF8Q6P2Q9 KARS-205ENST00000565738 607 ntTSL 23.35□□□□□ -1.871e-6■■□□□ 14.5
PRPF8Q6P2Q9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.2□□□□□ -1.91e-6■■□□□ 14.5
PRPF8Q6P2Q9 SRPK2-213ENST00000485455 436 ntTSL 33.18□□□□□ -1.91e-6■■□□□ 14.5
PRPF8Q6P2Q9 SRRM1-208ENST00000470243 721 ntTSL 53.1□□□□□ -1.915e-11■■□□□ 14.5
PRPF8Q6P2Q9 THOC2-212ENST00000464161 660 ntTSL 22.85□□□□□ -1.954e-10■■□□□ 14.5
PRPF8Q6P2Q9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.69□□□□□ -1.981e-6■■□□□ 14.5
PRPF8Q6P2Q9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.66□□□□□ -1.981e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-219ENST00000534049 562 ntTSL 42.65□□□□□ -1.991e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.991e-6■■□□□ 14.5
PRPF8Q6P2Q9 MDN1-203ENST00000468568 538 ntTSL 32.63□□□□□ -1.991e-12■■□□□ 14.5
PRPF8Q6P2Q9 SLF1-203ENST00000466957 593 ntTSL 52.58□□□□□ -21e-6■■□□□ 14.5
PRPF8Q6P2Q9 NCOA7-211ENST00000487635 758 ntTSL 1 (best)2.48□□□□□ -2.011e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.051e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.061e-6■■□□□ 14.5
PRPF8Q6P2Q9 OSBPL3-213ENST00000461835 306 ntTSL 22.13□□□□□ -2.071e-6■■□□□ 14.5
PRPF8Q6P2Q9 CSNK1G3-209ENST00000515322 1115 ntTSL 51.82□□□□□ -2.121e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-206ENST00000437302 445 ntTSL 51.34□□□□□ -2.191e-6■■□□□ 14.5
PRPF8Q6P2Q9 SLC35A3-203ENST00000422078 748 ntTSL 51.31□□□□□ -2.21e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-208ENST00000464001 316 ntTSL 21.17□□□□□ -2.221e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-212ENST00000480226 585 ntTSL 41.17□□□□□ -2.221e-6■■□□□ 14.5
PRPF8Q6P2Q9 DROSHA-205ENST00000505601 552 ntTSL 40.9□□□□□ -2.261e-6■■□□□ 14.5
PRPF8Q6P2Q9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.87□□□□□ -2.271e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-213ENST00000484088 580 ntTSL 40.8□□□□□ -2.281e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-216ENST00000493758 366 ntTSL 30.67□□□□□ -2.31e-6■■□□□ 14.5
PRPF8Q6P2Q9 KIF21A-211ENST00000552475 502 ntTSL 50.61□□□□□ -2.311e-6■■□□□ 14.5
PRPF8Q6P2Q9 DROSHA-206ENST00000507174 572 ntTSL 40.52□□□□□ -2.331e-6■■□□□ 14.5
PRPF8Q6P2Q9 KIF21A-209ENST00000551066 593 ntTSL 30.47□□□□□ -2.331e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-205ENST00000508080 712 ntTSL 30.23□□□□□ -2.371e-6■■□□□ 14.5
PRPF8Q6P2Q9 FBXW11-205ENST00000518106 425 ntTSL 30.12□□□□□ -2.391e-6■■□□□ 14.5
PRPF8Q6P2Q9 AHR-204ENST00000481944 518 ntTSL 2-0.13□□□□□ -2.431e-6■■□□□ 14.5
PRPF8Q6P2Q9 NCOA7-205ENST00000419660 488 ntTSL 5-1.12□□□□□ -2.591e-6■■□□□ 14.5
PRPF8Q6P2Q9 SLC43A3-212ENST00000529113 541 ntTSL 511.58□□□□□ -0.561e-7■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-207ENST00000587311 1905 ntTSL 213.76□□□□□ -0.211e-11■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-204ENST00000586720 1736 ntTSL 513.08□□□□□ -0.321e-11■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.04□□□□□ -0.321e-11■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-205ENST00000587251 2091 ntTSL 512.8□□□□□ -0.361e-11■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.64□□□□□ -0.391e-11■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-214ENST00000589527 818 ntTSL 311.91□□□□□ -0.51e-11■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-211ENST00000588587 1020 ntTSL 511.75□□□□□ -0.531e-11■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-208ENST00000588198 1132 ntTSL 211.55□□□□□ -0.561e-11■■□□□ 14.5
PRPF8Q6P2Q9 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.91e-11■■□□□ 14.5
PRPF8Q6P2Q9 FUS-208ENST00000564766 791 ntTSL 22.73□□□□□ -1.976e-19■■□□□ 14.5
PRPF8Q6P2Q9 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC9.81□□□□□ -0.842e-6■■□□□ 14.5
PRPF8Q6P2Q9 ATAT1-201ENST00000318999 2611 ntTSL 1 (best) BASIC9.61□□□□□ -0.872e-6■■□□□ 14.5
PRPF8Q6P2Q9 ATAT1-203ENST00000329992 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.952e-6■■□□□ 14.5
PRPF8Q6P2Q9 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.982e-6■■□□□ 14.5
PRPF8Q6P2Q9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.59■□□□□ 0.252e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-202ENST00000339290 3365 ntTSL 1 (best)14.1□□□□□ -0.152e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-214ENST00000525477 3431 ntTSL 1 (best)13.38□□□□□ -0.272e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.312e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.332e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-210ENST00000463282 3422 ntTSL 1 (best)12.66□□□□□ -0.382e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-237ENST00000533837 3492 ntTSL 1 (best)12.65□□□□□ -0.382e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.61□□□□□ -0.392e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.61□□□□□ -0.392e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-204ENST00000367812 3565 ntTSL 1 (best)12.61□□□□□ -0.392e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.48□□□□□ -0.412e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.422e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-216ENST00000525940 1838 ntTSL 1 (best)6.51□□□□□ -1.372e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-231ENST00000531634 1824 ntTSL 1 (best)6.51□□□□□ -1.372e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC6.51□□□□□ -1.372e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC6.51□□□□□ -1.372e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-232ENST00000531737 2436 ntTSL 1 (best)6.21□□□□□ -1.422e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-225ENST00000528345 1973 ntTSL 1 (best)5.89□□□□□ -1.472e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-227ENST00000529262 2427 ntTSL 1 (best)5.71□□□□□ -1.52e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-234ENST00000533384 2521 ntTSL 1 (best)5.39□□□□□ -1.552e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-218ENST00000526320 3081 ntTSL 1 (best)5.06□□□□□ -1.62e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-219ENST00000526565 2399 ntTSL 1 (best)5.01□□□□□ -1.612e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-223ENST00000528140 2021 ntTSL 1 (best)4.91□□□□□ -1.622e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-224ENST00000528343 2091 ntTSL 1 (best)4.84□□□□□ -1.632e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-211ENST00000524588 1630 ntTSL 1 (best)4.84□□□□□ -1.632e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-212ENST00000525002 2182 ntTSL 1 (best)4.7□□□□□ -1.662e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-217ENST00000526187 2192 ntTSL 1 (best)4.7□□□□□ -1.662e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-236ENST00000533808 3349 ntTSL 1 (best)4.6□□□□□ -1.672e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-215ENST00000525514 3288 ntTSL 1 (best)4.22□□□□□ -1.732e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.792e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-208ENST00000438901 3481 ntTSL 1 (best)3.8□□□□□ -1.82e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-220ENST00000526889 3157 ntTSL 1 (best)3.74□□□□□ -1.812e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.66□□□□□ -1.822e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-229ENST00000529586 3203 ntTSL 1 (best)3.48□□□□□ -1.852e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-222ENST00000528015 2201 ntTSL 1 (best)3.11□□□□□ -1.912e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.03□□□□□ -1.922e-7■■□□□ 14.5
PRPF8Q6P2Q9 MYB-230ENST00000531519 2911 ntTSL 1 (best)2.37□□□□□ -2.032e-7■■□□□ 14.5
PRPF8Q6P2Q9 SRSF4-204ENST00000489898 393 ntTSL 310.4□□□□□ -0.746e-8■■□□□ 14.5
PRPF8Q6P2Q9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.56e-8■■□□□ 14.5
PRPF8Q6P2Q9 FDPS-210ENST00000474345 713 ntTSL 312.66□□□□□ -0.382e-10■■□□□ 14.5
PRPF8Q6P2Q9 AC126755.1-203ENST00000538220 558 ntTSL 215.9■□□□□ 0.141e-26■■□□□ 14.5
PRPF8Q6P2Q9 AC126755.1-204ENST00000433020 525 ntTSL 314.09□□□□□ -0.151e-26■■□□□ 14.5
PRPF8Q6P2Q9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.36e-7■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-212ENST00000466121 522 ntTSL 211.81□□□□□ -0.522e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-209ENST00000441298 574 ntTSL 410.91□□□□□ -0.662e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-204ENST00000412947 595 ntTSL 1 (best)10.44□□□□□ -0.742e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-210ENST00000449785 735 ntTSL 310.44□□□□□ -0.742e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-211ENST00000460331 562 ntTSL 410.1□□□□□ -0.792e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-201ENST00000292393 512 ntTSL 29.73□□□□□ -0.852e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-214ENST00000485892 722 ntTSL 29.62□□□□□ -0.872e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-208ENST00000428683 999 ntTSL 28.78□□□□□ -12e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-205ENST00000413658 1441 ntTSL 1 (best) BASIC8.6□□□□□ -1.032e-8■■□□□ 14.5
Retrieved 100 of 73,762 protein–RNA pairs in 1875.6 ms