RNA–Protein interactions for RNA: ENST00000565738.1

KARS-205, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-205ENST00000565738 AEBP2Q6ZN18 517 aaPredicted RBP28.52■■■□□ 2.16
KARS-205ENST00000565738 CHIC1Q5VXU3 224 aa28.31■■■□□ 2.12
KARS-205ENST00000565738 PHF23Q9BUL5 403 aaPredicted RBP24.97■■□□□ 1.59
KARS-205ENST00000565738 SENP3Q9H4L4 574 aaPredicted RBP24.1■■□□□ 1.45
KARS-205ENST00000565738 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
KARS-205ENST00000565738 FOXD1Q16676 465 aa22.33■■□□□ 1.17
KARS-205ENST00000565738 ADRA2BP18089 450 aa21.93■■□□□ 1.1
KARS-205ENST00000565738 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
KARS-205ENST00000565738 PIAS4Q8N2W9 510 aaPredicted RBP21.22■□□□□ 0.99
KARS-205ENST00000565738 KCNA4P22459 653 aa20.67■□□□□ 0.9
KARS-205ENST00000565738 PPP4R3CPQ6ZMV5 832 aa20.55■□□□□ 0.88
KARS-205ENST00000565738 MSH5O43196 834 aa20.36■□□□□ 0.85
KARS-205ENST00000565738 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
KARS-205ENST00000565738 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
KARS-205ENST00000565738 EHMT2Q96KQ7 1210 aa19.88■□□□□ 0.77
KARS-205ENST00000565738 NPM3O75607 178 aaKnown RBP19.86■□□□□ 0.77
KARS-205ENST00000565738 CNKSR2Q8WXI2 1034 aa19.83■□□□□ 0.77
KARS-205ENST00000565738 SLC4A1APQ9BWU0 796 aaKnown RBP19.78■□□□□ 0.76
KARS-205ENST00000565738 MAPK8IP2Q13387 824 aaPredicted RBP19.75■□□□□ 0.75
KARS-205ENST00000565738 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
KARS-205ENST00000565738 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
KARS-205ENST00000565738 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
KARS-205ENST00000565738 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
KARS-205ENST00000565738 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
KARS-205ENST00000565738 ZBTB22O15209 634 aa19.01■□□□□ 0.63
KARS-205ENST00000565738 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
KARS-205ENST00000565738 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
KARS-205ENST00000565738 DCAF8L1A6NGE4 600 aa18.6■□□□□ 0.57
KARS-205ENST00000565738 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
KARS-205ENST00000565738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.528e-8■■■□□ 16.4
KARS-205ENST00000565738 ATXN8OSP0DMR3 200 aa18.08■□□□□ 0.48
KARS-205ENST00000565738 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
KARS-205ENST00000565738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
KARS-205ENST00000565738 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
KARS-205ENST00000565738 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
KARS-205ENST00000565738 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
KARS-205ENST00000565738 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
KARS-205ENST00000565738 APLP2Q06481 763 aa17.62■□□□□ 0.41
KARS-205ENST00000565738 FKBP8Q14318 412 aa17.49■□□□□ 0.39
KARS-205ENST00000565738 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
KARS-205ENST00000565738 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
KARS-205ENST00000565738 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
KARS-205ENST00000565738 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
KARS-205ENST00000565738 CAPN15O75808 1086 aa17.33■□□□□ 0.36
KARS-205ENST00000565738 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
KARS-205ENST00000565738 POLA2Q14181 598 aa17.15■□□□□ 0.34
KARS-205ENST00000565738 ABCB7O75027 752 aa17.06■□□□□ 0.32
KARS-205ENST00000565738 FBLN2P98095 1184 aa17.06■□□□□ 0.32
KARS-205ENST00000565738 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
KARS-205ENST00000565738 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
KARS-205ENST00000565738 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
KARS-205ENST00000565738 DSG3P32926 999 aa16.84■□□□□ 0.29
KARS-205ENST00000565738 RTN4Q9NQC3 1192 aaKnown RBP16.78■□□□□ 0.28
KARS-205ENST00000565738 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
KARS-205ENST00000565738 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
KARS-205ENST00000565738 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
KARS-205ENST00000565738 PROM2Q8N271 834 aa16.64■□□□□ 0.25
KARS-205ENST00000565738 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
KARS-205ENST00000565738 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
KARS-205ENST00000565738 SPDYE2BA6NHP3 402 aa16.45■□□□□ 0.22
KARS-205ENST00000565738 SPDYE6P0CI01 402 aa16.45■□□□□ 0.22
KARS-205ENST00000565738 VASPP50552 380 aaPredicted RBP16.45■□□□□ 0.22
KARS-205ENST00000565738 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
KARS-205ENST00000565738 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
KARS-205ENST00000565738 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
KARS-205ENST00000565738 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
KARS-205ENST00000565738 STAG3Q9UJ98 1225 aa16.17■□□□□ 0.18
KARS-205ENST00000565738 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
KARS-205ENST00000565738 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
KARS-205ENST00000565738 MIER1Q8N108 512 aa16.04■□□□□ 0.16
KARS-205ENST00000565738 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
KARS-205ENST00000565738 SPOCK2Q92563 424 aa15.99■□□□□ 0.15
KARS-205ENST00000565738 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
KARS-205ENST00000565738 AKT1S1Q96B36 256 aa15.93■□□□□ 0.14
KARS-205ENST00000565738 PLEKHG5O94827 1062 aa15.91■□□□□ 0.14
KARS-205ENST00000565738 PKD2Q13563 968 aa15.9■□□□□ 0.14
KARS-205ENST00000565738 DCAF8L2P0C7V8 631 aa15.89■□□□□ 0.13
KARS-205ENST00000565738 SPDYE1Q8NFV5 336 aaPredicted RBP15.87■□□□□ 0.13
KARS-205ENST00000565738 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
KARS-205ENST00000565738 REM2Q8IYK8 340 aaPredicted RBP15.81■□□□□ 0.12
KARS-205ENST00000565738 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
KARS-205ENST00000565738 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
KARS-205ENST00000565738 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
KARS-205ENST00000565738 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
KARS-205ENST00000565738 PITPNM1O00562 1244 aa15.64■□□□□ 0.09
KARS-205ENST00000565738 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
KARS-205ENST00000565738 RGL2O15211 777 aa15.58■□□□□ 0.08
KARS-205ENST00000565738 NUBP1P53384 320 aa15.53■□□□□ 0.08
KARS-205ENST00000565738 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
KARS-205ENST00000565738 GSE1Q14687 1217 aa15.5■□□□□ 0.07
KARS-205ENST00000565738 DCAF8Q5TAQ9 597 aa15.49■□□□□ 0.07
KARS-205ENST00000565738 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
KARS-205ENST00000565738 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
KARS-205ENST00000565738 FAM212AQ96EL1 285 aa15.43■□□□□ 0.06
KARS-205ENST00000565738 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
KARS-205ENST00000565738 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
KARS-205ENST00000565738 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
KARS-205ENST00000565738 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
KARS-205ENST00000565738 BBXQ8WY36 941 aaPredicted RBP15.37■□□□□ 0.05
KARS-205ENST00000565738 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 262.7 ms