Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC099509.2-201ENST00000513926 406 ntTSL 3 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AC021915.1-201ENST00000522541 824 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 KIR3DP1-201ENST00000580853 628 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 YARS-210ENST00000616261 1167 ntTSL 5 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 CXorf21-201ENST00000378962 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 LINC02363-201ENST00000317596 2153 ntTSL 2 BASIC8.34□□□□□ -1.08
NPIPA3F8WFD2 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
NPIPA3F8WFD2 ARHGEF26-205ENST00000496710 3781 ntTSL 2 BASIC8.34□□□□□ -1.08
NPIPA3F8WFD2 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC8.34□□□□□ -1.08
NPIPA3F8WFD2 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AL591222.1-201ENST00000568063 3844 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 MAPK10-386ENST00000642038 2354 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 EXD2-202ENST00000409014 3404 ntTSL 2 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SPACA9-201ENST00000350499 894 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SNORA55-201ENST00000364587 135 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 U3.38-201ENST00000408534 216 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SAA2-202ENST00000414546 1022 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC004129.1-201ENST00000417617 796 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 LINC02020-204ENST00000435548 604 ntTSL 4 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 DCTN4-202ENST00000446090 1737 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 POLR2CP1-201ENST00000453699 765 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AP001318.1-201ENST00000476981 321 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 LINC02042-201ENST00000481624 2022 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC136628.1-201ENST00000503218 561 ntTSL 4 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AMD1P3-201ENST00000508874 994 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC080079.1-201ENST00000509326 1045 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 NNT-208ENST00000512996 4288 ntTSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 NCOA4P4-201ENST00000513338 1861 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 LMO3-222ENST00000540445 906 ntTSL 2 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC084357.3-202ENST00000543539 679 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC078865.1-201ENST00000547174 562 ntTSL 4 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 Z98884.2-201ENST00000602406 393 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 TRMT112P7-201ENST00000603133 367 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AL122127.1-201ENST00000603832 327 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SLC25A14-215ENST00000612248 1734 ntTSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AL118508.2-201ENST00000622708 673 ntTSL 3 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AC004241.4-201ENST00000622792 1120 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 ANKRD20A21P-202ENST00000623715 3588 ntBASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC8.33□□□□□ -1.08
NPIPA3F8WFD2 WWP2-216ENST00000569174 2474 ntTSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ERMARD-203ENST00000366773 2141 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 ATP6AP1L-201ENST00000380167 2503 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC8.32□□□□□ -1.08
NPIPA3F8WFD2 CBWD1-205ENST00000382389 1807 ntTSL 2 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms