Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 OR5G5P-204ENST00000627642 621 ntBASIC8.33□□□□□ -1.08
P04436 AL109920.1-201ENST00000632749 415 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
P04436 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 CBWD1-205ENST00000382389 1807 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC8.33□□□□□ -1.08
P04436 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 ARCN1-205ENST00000614498 2238 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
P04436 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 AC239799.2-201ENST00000622359 2002 ntBASIC8.32□□□□□ -1.08
P04436 CTBP2P2-201ENST00000434549 1334 ntBASIC8.32□□□□□ -1.08
P04436 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 AC105105.1-201ENST00000591360 2553 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 UNC5D-205ENST00000449677 2448 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC8.32□□□□□ -1.08
P04436 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 NCAM1-213ENST00000531044 2826 ntTSL 5 BASIC8.32□□□□□ -1.08
P04436 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
P04436 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
P04436 NPIPA5-201ENST00000360151 1088 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 RNA5SP69-201ENST00000364477 117 ntBASIC8.32□□□□□ -1.08
P04436 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 MIR1306-201ENST00000408439 85 ntBASIC8.32□□□□□ -1.08
P04436 SET-205ENST00000409104 962 ntTSL 5 BASIC8.32□□□□□ -1.08
P04436 RN7SKP112-201ENST00000411213 318 ntBASIC8.32□□□□□ -1.08
P04436 AL353604.1-201ENST00000413901 596 ntTSL 3 BASIC8.32□□□□□ -1.08
P04436 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 OR51A8P-201ENST00000421277 940 ntBASIC8.32□□□□□ -1.08
P04436 LLPHP2-201ENST00000436405 396 ntBASIC8.32□□□□□ -1.08
P04436 AC104772.1-201ENST00000444764 862 ntBASIC8.32□□□□□ -1.08
P04436 GAPDHP45-201ENST00000452090 349 ntBASIC8.32□□□□□ -1.08
P04436 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC8.32□□□□□ -1.08
P04436 AC092965.1-201ENST00000469748 490 ntBASIC8.32□□□□□ -1.08
P04436 RN7SL318P-201ENST00000471955 297 ntBASIC8.32□□□□□ -1.08
P04436 RN7SL520P-201ENST00000474110 286 ntBASIC8.32□□□□□ -1.08
P04436 RN7SL800P-201ENST00000484823 280 ntBASIC8.32□□□□□ -1.08
P04436 AC092958.1-202ENST00000485006 424 ntTSL 3 BASIC8.32□□□□□ -1.08
P04436 SMIM19-205ENST00000490331 487 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
P04436 NPC2-209ENST00000557510 1029 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 WDR61-202ENST00000558311 1266 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
P04436 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC8.32□□□□□ -1.08
P04436 AC132186.1-201ENST00000566896 354 ntBASIC8.32□□□□□ -1.08
P04436 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC8.32□□□□□ -1.08
P04436 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC8.32□□□□□ -1.08
P04436 U62631.1-201ENST00000597110 435 ntTSL 3 BASIC8.32□□□□□ -1.08
P04436 AL645949.1-202ENST00000600073 242 ntBASIC8.32□□□□□ -1.08
P04436 AC091810.1-201ENST00000603131 325 ntBASIC8.32□□□□□ -1.08
P04436 AC019322.2-201ENST00000605634 147 ntBASIC8.32□□□□□ -1.08
P04436 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC8.32□□□□□ -1.08
P04436 Z99916.3-201ENST00000623422 1080 ntBASIC8.32□□□□□ -1.08
P04436 AC011472.5-201ENST00000624079 508 ntBASIC8.32□□□□□ -1.08
P04436 OR51A8P-202ENST00000641606 1038 ntBASIC8.32□□□□□ -1.08
P04436 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC8.32□□□□□ -1.08
P04436 CHEK2-206ENST00000402731 1545 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
P04436 CYP4A11-202ENST00000371904 1760 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
P04436 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 AL157714.2-203ENST00000438275 2400 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC8.32□□□□□ -1.08
P04436 ISX-202ENST00000404699 3094 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 VWA5A-202ENST00000392744 2691 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
P04436 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC8.32□□□□□ -1.08
P04436 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
P04436 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 ODF2-210ENST00000444119 2418 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC8.31□□□□□ -1.08
P04436 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
P04436 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
P04436 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 MCTP1-204ENST00000505078 2629 ntTSL 2 BASIC8.31□□□□□ -1.08
P04436 LINC01344-203ENST00000608183 2631 ntTSL 2 BASIC8.31□□□□□ -1.08
P04436 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms